| DNA & RNA Element - miRNAMap |
| Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
| Dcun1d3 | mmu-let-7a | 808 | 835 | UGAUAUGU------UGG-AUGAUGGAGU- | ||:|| :| |:|||||||| | --AAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7b | 791 | 835 | -UUGGUG----UGU---------------UGG-AUGAUGGAGU | |||||| :|| :| |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7c | 791 | 835 | -UUGGU-------------AUGU------UGG-AUGAUGGAGU | ||||| |:|| :| |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7e | 1596 | 1618 | -UGAUAUGUUGGAGGAUGGAGU- | :||: || : ||||||||:| | AGCUG-ACUCUGUCCUACCUUAU |
| Dcun1d3 | mmu-let-7f | 819 | 835 | UGAUAUGUUAGAUGAUGGAGU- | :||:| :|||||||| | ----AGCAGU--GCUACCUCAG |
| Dcun1d3 | mmu-let-7g | 803 | 835 | -UGAC--AUGUU-------UGAUGAUGGAGU- | |:|| |:||: | |:|||||||| | CAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7i | 810 | 835 | -UGUCG----UGUUUGAUGAUGGAGU- | :||| :||: |:|||||||| | UGCAGAGAAAGCAG--UGCUACCUCAG |
| Dcun1d3 | mmu-miR-1 | 670 | 688 | AUGUAUGAAGAAAU-GUAAGGU | ||||||| |||||| | ----CACUUCUUGCUCAUUCCU |
| Dcun1d3 | mmu-miR-101a | 429 | 453 | GAAGUCAA---UAGUGUCAUGACAU- | ||||| :|| |||||||: | UUUCAGGGCAGGUCU--GUACUGUGU |
| Dcun1d3 | mmu-miR-101b | 429 | 453 | GAAGUCGA---UAGUGUCAUGACAU- | ||||| :|| |||||||: | UUUCAGGGCAGGUCU--GUACUGUGU |
| Dcun1d3 | mmu-miR-103 | 113 | 152 | -AGUAUCGGGACAUG---------------UUACGACGA | || |||:||||: |||||||: | UUCUCUGCCUUGUAUUUGAAAGGGCUCUAAAAUGCUGUA |
| Dcun1d3 | mmu-miR-107 | 118 | 152 | ACUAUCGGGACAUG---------------UUACGACGA | |||:||||: |||||||: | ----UGCCUUGUAUUUGAAAGGGCUCUAAAAUGCUGUA |
| Dcun1d3 | mmu-miR-129-3p | 322 | 347 | UACGAAAAACCCCA----UUCCCGAA | ||:||| ||||| :||||: | UUGUUUUGUGGGGGAGGGGAGGGUG- |
| Dcun1d3 | mmu-miR-130a | 1142 | 1181 | -UACGGGA-------AAAU--------UGUAAC-GUGAC | :|||||| |||: ||:||| |||| | UGUGCCCUCUCCCUCUUUGCUGCGCCCACGUUGUCACUU |
| Dcun1d3 | mmu-miR-132 | 348 | 374 | GCUGGU---ACCGACAUCUGACAAU- | | ||: ||| ||:|::||||| | AGCCCGGGUUGGGAGUGGGUUGUUAG |
| Dcun1d3 | mmu-miR-134 | 1561 | 1585 | -GGG-GAGACCAGUUGGUCAGUGU | || ||:||||||| | | ||| | GCCAGCUUUGGUCAAGCUGCCACU |
| Dcun1d3 | mmu-miR-135b | 561 | 588 | GUGUAU--CCUU----ACUUUUCGGUAU | ||| |||: ||:|:||||| | GACAGUUUGGAGCUCUUGGAGAGCCAA- |
| Dcun1d3 | mmu-miR-138 | 1554 | 1569 | CUAAGUGUUGUGGUCGA- | :|||| :|||||| | ---CUACAAGGCCAGCUU |
| Dcun1d3 | mmu-miR-144 | 432 | 453 | GAUCAUGUAGUAGAUAUGACAU- | || :|| :|||:||||||: | -CAGGGCAG-GUCUGUACUGUGU |
| Dcun1d3 | mmu-miR-146 | 1514 | 1538 | UUGGGUACCUUAA--GUCAAGAGU | :|| | |||: |||||||| | UGCCGAAGGAGGAACCAGUUCUCU |
| Dcun1d3 | mmu-miR-146b | 1514 | 1538 | UCGGAUACCUUAA--GUCAAGAGU | ||| |||: |||||||| | UGCCGAAGGAGGAACCAGUUCUCU |
| Dcun1d3 | mmu-miR-149 | 333 | 368 | -CCUCA-CUUCU-----------GUGCCUCGGUCU | |||| ||:|: : ||||: :| | GGGAGGGGAGGGUGUAGCCCGGGUUGGGAGUGGGU |
| Dcun1d3 | mmu-miR-150 | 342 | 364 | GUGACCAUGUU---CCCAACCCUCU | |||::|: |||||||||| | ---GGGUGUAGCCCGGGUUGGGAGU |
| Dcun1d3 | mmu-miR-152 | 589 | 622 | GGGUUCAAGACAGU--------ACGU--GACU- | ||||| | |||| |||| |||| | GCCAAGGCCAGUCAAGAGCAUUUGCAGUCUGAC |
| Dcun1d3 | mmu-miR-15b | 442 | 465 | -ACAUUUGGUACUA--CACGACGAU | ||| ||::|| ||||||:| | CUGU--ACUGUGUGUAGUGCUGUUU |
| Dcun1d3 | mmu-miR-196a | 1392 | 1415 | -GGUUGUUGUA-CUUUGAUGGAU | ||| || |:|:||:||| | GCCAUGAAAGAGGGAGCUGCCUU |
| Dcun1d3 | mmu-miR-196b | 1392 | 1415 | -GGUUGUUG-UCCUUUGAUGGAU | ||| || |||:|:||:||| | GCCAUGAAAGAGGGAGCUGCCUU |
| Dcun1d3 | mmu-miR-199a | 1563 | 1589 | CUUGU--CCA--UCAGACUUGUGACCC- | |:| ||| || ||| ||||||| | CAGCUUUGGUCAAG-CUGC-CACUGGGG |
| Dcun1d3 | mmu-miR-199a* | 1435 | 1469 | UUGGUUACACG-----------UCUGAUGACAU- | :||| | || ||:|||:|||| | UGCCAGGGAGCAUCAUAAACGGAGGCUAUUGUAU |
| Dcun1d3 | mmu-miR-199b | 1563 | 1589 | CUUGU--CCA--UCAGAUUUGUGACCC- | |:| ||| || ||: ||||||| | CAGCUUUGGUCAAG-CUGC-CACUGGGG |
| Dcun1d3 | mmu-miR-19a | 410 | 449 | -AGUCAAAACGUA---------------UCUAAACGUGU | |||||||||||| ||:| ||:|| | CUCAGUUUUGCAUAUUAUUUUUCAGGGCAGGUCUGUACU |
| Dcun1d3 | mmu-miR-200a | 542 | 568 | -UGUAGCAAU------GGUCUGUCACAAU | ||||:| ||||||||| | CACAUUGCAUUAAUUUCCAGACAGUU--- |
| Dcun1d3 | mmu-miR-202 | 715 | 741 | AGAA-GGGUAC----GCGAUAUGGAGA | ||| ||||| :|||:||||| | ACUUACCCAUCAUCAUGCUGUACCUG- |
| Dcun1d3 | mmu-miR-203 | 1682 | 1723 | GAUCACCA-----GGAU---------------UUGUAAAGU | :|||| |:|: ||||||||: | -GGGUGGCAGGAGCUUGUACAGUUCAGCUUCCAACAUUUCGG |
| Dcun1d3 | mmu-miR-206 | 666 | 688 | -GGUGUGUGAAGGAAU-GUAAGGU | || ||||||:| |||||| | CCCU--CACUUCUUGCUCAUUCCU |
| Dcun1d3 | mmu-miR-207 | 330 | 365 | -CUCCCUCCUCUC--------GGUCC--UCUUCG- | |:||||||:||| ||:|| :|:||: | UGGGGGAGGGGAGGGUGUAGCCCGGGUUGGGAGUG |
| Dcun1d3 | mmu-miR-20b | 734 | 763 | -AUGGAC-GUGA---UACUCGU-GAAAC- | |||||| || | :|||||| :|||| | GUACCUGUCAGUCAAGUGAGCAGUUUUGU |
| Dcun1d3 | mmu-miR-214 | 30 | 48 | -GACGGACAGACACGGACGACA | ||||||| ||| ||||| | UCUGCCUG-CUGC-CCUGCA-- |
| Dcun1d3 | mmu-miR-216b | 924 | 951 | AGUGUAAACGGACGUCUC-----UAAAGGG | ||||||||| ::||| :||||| | --UCAUUUGCCU-UGGAGCCAAAGUUUCCG |
| Dcun1d3 | mmu-miR-223 | 1584 | 1604 | -CCCCAUAAACUGUUUGACUGU | |||| ||| :|:||||| | UGGGGCC--UGAAGAGCUGACU |
| Dcun1d3 | mmu-miR-224 | 1227 | 1247 | AUUUGCCUUGGUG-AUCACUGAAU | :|| : || |:|||||| | ---UUGGGGUAACGUGGUGACUG- |
| Dcun1d3 | mmu-miR-24 | 22 | 53 | -GACAA------GGACGACUUGAC-UCGGU- | ||| ||||||| ||| ||||| | ACUGAGGAUCUGCCUGCUGCCCUGCAGCCAA |
| Dcun1d3 | mmu-miR-24* | 145 | 168 | -UGACUAUAGU-CGAGUCAUCCGUG- | :||| ||||| |:|: ||||||| | UGCUG-UAUCAUGUUU--UAGGCACU |
| Dcun1d3 | mmu-miR-25 | 1052 | 1080 | -AGUC---UGGCU---CUGUUCACGUUAC | |:|| ||: |:||||||||: | AUUAGCUUACUUGUCUGGCAAGUGCAGA- |
| Dcun1d3 | mmu-miR-28 | 550 | 579 | GAGUUA----UCUGACA---CUCGAGGAA | |:||| |||| || ||||||:| | AUUAAUUUCCAGACAGUUUGGAGCUCUUG |
| Dcun1d3 | mmu-miR-291b-5p | 1559 | 1575 | CUCUCCCGGAGGUGAAACUAG- | |||| :|||||:|| | ----AGGCCA--GCUUUGGUCA |
| Dcun1d3 | mmu-miR-296 | 314 | 354 | -UGUCCUAA------------CUCCCC-CC-----CGGGA | |:|||||| |||||| || |||| | GAUAGGAUUUGUUUUGUGGGGGAGGGGAGGGUGUAGCCCG |
| Dcun1d3 | mmu-miR-297 | 1286 | 1304 | GUACGUGUACGUGUGUAUGUA- | |||||:|:|:|||||| | ----GACAUGUAUAUAUACAUA |
| Dcun1d3 | mmu-miR-298 | 1084 | 1107 | CCUUCUUGUCGGGAG-GAGACGG- | :||: ::|||: ||||||| | -UGAGGCUGGCCUGAACUCUGCCA |
| Dcun1d3 | mmu-miR-301 | 688 | 707 | CGAAACUGUUAUGAUAACGUGAC | ||||||| ||||||||:| | UCUUUGAC----CUAUUGCAUUU |
| Dcun1d3 | mmu-miR-301b | 764 | 791 | -ACGAAACUGUUAUG-GUAACGUGAC- | ||:|||| |: || |||||:|||| | UUGUUUUGUUAGAACACAUUGUACUGA |
| Dcun1d3 | mmu-miR-302 | 582 | 614 | AGUGGUUUUGUA-CC--------UUCGUGAAU- | :||||::| || :||||:||: | -AGCCAAGGCCAAGGCCAGUCAAGAGCAUUUGC |
| Dcun1d3 | mmu-miR-30a-3p | 971 | 995 | CGACGUUUGUA-GGCU-GACUUUC- | ||| :| |||| ||||||| | -GUGCCUGCCAGCCGACCUGAAAGA |
| Dcun1d3 | mmu-miR-30b | 446 | 469 | UCGACUCACAUC-CUACAAAUGU- | ||| |||||| | |||||||| | -ACUGUGUGUAGUGCUGUUUACAU |
| Dcun1d3 | mmu-miR-30c | 446 | 469 | CGACUCUCACAUC-CUACAAAUGU- | ||| |||||| | |||||||| | ACUGU--GUGUAGUGCUGUUUACAU |
| Dcun1d3 | mmu-miR-30e* | 969 | 995 | GACAUU--UGUA-GGCU-GACUUUC- | |||: :| |||| ||||||| | GUGUGCCUGCCAGCCGACCUGAAAGA |
| Dcun1d3 | mmu-miR-31 | 397 | 422 | GUCGAUACGGUCG-----UAGAACGGA | || :|||||| :|:|||| | -UGCAGUGCCAGACCUCAGUUUUGCA- |
| Dcun1d3 | mmu-miR-323 | 434 | 461 | -UC-UCCAG-C-UGGCACAUUACACG- | :| ||||| | ||:||||: |||| | GGGCAGGUCUGUACUGUGUGUAGUGCU |
| Dcun1d3 | mmu-miR-324-3p | 977 | 1005 | -GGUCGUCGUGGACCC-----CGUCACC- | ||||| | ||||| ||:|||| | GCCAGCCG-ACCUGAAAGAAAGCGGUGGC |
| Dcun1d3 | mmu-miR-326 | 329 | 362 | UGACCUCCUUCC---------CGGGUC---UCC- | |||:|||:|| ||||:| :|| | -GUGGGGGAGGGGAGGGUGUAGCCCGGGUUGGGA |
| Dcun1d3 | mmu-miR-329 | 337 | 366 | -UUUUUCCAA-------UCGACCCACACAA | :::|:||| :|:|||| ||| | GGGGAGGGUGUAGCCCGGGUUGGGAGUGG- |
| Dcun1d3 | mmu-miR-331 | 340 | 361 | AAGAUCCUAUC-CGGGUCC--CCG | |||:|: ||||:|| || | ---GAGGGUGUAGCCCGGGUUGGG |
| Dcun1d3 | mmu-miR-335 | 561 | 581 | -UGUAAAAAGCAAUAACGAGAACU- | ||| ||:| |||||||: | GACAG--UUUGGA---GCUCUUGGA |
| Dcun1d3 | mmu-miR-338 | 1074 | 1094 | AGUUGUUUUAGUGACUACGACCU | :||:|| | |||| ||||| | --UGCAGAAGC-CUGAGGCUGGC |
| Dcun1d3 | mmu-miR-339 | 569 | 591 | ACUCGAGGACCUCCUG--UCCCU | ||||||:||||| :| ||| | GGAGCUCUUGGAGAGCCAAGGC- |
| Dcun1d3 | mmu-miR-341 | 974 | 996 | UGACUGGCUGGCUGG-CUAGCU- | ||| || :|||||| || || | CCUG-CCAGCCGACCUGAAAGAA |
| Dcun1d3 | mmu-miR-342 | 328 | 363 | -CUGCCCA--CGCUAAAGACACA----------CUCU- | | ||| | || |||| |:|| | UGUGGGGGAGGGGAGG---GUGUAGCCCGGGUUGGGAG |
| Dcun1d3 | mmu-miR-34a | 1555 | 1584 | UUGU--UGGUCGAUUCUG---UGACGGU- | ||| :|||||| |: :|||||| | UACAAGGCCAGCUUUGGUCAAGCUGCCAC |
| Dcun1d3 | mmu-miR-34b | 1556 | 1583 | -GUUA--GUCGAUUAAUG--UGACGGAU | ||| ||||| :||||| | ACAAGGCCAGCUUUGGUCAAGCUGCCA- |
| Dcun1d3 | mmu-miR-34c | 1556 | 1593 | CGUUA--GUCGA-------UUGAU-GUGA---CGGA- | ||| ||||| |:||: |||| |||| | ACAAGGCCAGCUUUGGUCAAGCUGCCACUGGGGCCUG |
| Dcun1d3 | mmu-miR-376a* | 3 | 37 | -GAGUA----UCUUC-------CUCUUAGAUGG- | ||| ||:|| |||:||||:|| | GCUCUGUUCCAGGAGCAGCACUGAGGAUCUGCCU |
| Dcun1d3 | mmu-miR-378 | 314 | 344 | UGUGUCCUGGA--------CCUCAGUCCUC- | |:||||::| ||:| :|||| | -GAUAGGAUUUGUUUUGUGGGGGAGGGGAGG |
| Dcun1d3 | mmu-miR-380-5p | 523 | 545 | CGCGU-ACAAGAUACCAGUUGGU- | ||| |||| ||:|:||| | -AGCAGUGUUAACU-GUUAGCCAC |
| Dcun1d3 | mmu-miR-411 | 339 | 378 | UGACUCCCAA--------------UCACCUGGCA---CAA | |||||| |||||: || ||| | --GGAGGGUGUAGCCCGGGUUGGGAGUGGGUUGUUAGGUUG |
| Dcun1d3 | mmu-miR-422b | 1586 | 1611 | -CCGGAA-----GACUGAGGUUCAGGUC | ||||| |||||||: |||| | GGGCCUGAAGAGCUGACUCU--GUCCU- |
| Dcun1d3 | mmu-miR-424 | 9 | 42 | -AGGU-UUUGU----ACUUA---AC-GACGAC- | |||| :|:|| |||: || |||||| | UUCCAGGAGCAGCACUGAGGAUCUGCCUGCUGC |
| Dcun1d3 | mmu-miR-429 | 547 | 568 | UGCCGUAAU----GGUCUGUCAUAAU | |||||| ||||||||| | --UGCAUUAAUUUCCAGACAGUU--- |
| Dcun1d3 | mmu-miR-434-3p | 333 | 363 | -CCUCAG--CUCACUA-----CCAAGUUU- | |||| |:||| |||| ::| | GGGAGGGGAGGGUGUAGCCCGGGUUGGGAG |
| Dcun1d3 | mmu-miR-449 | 1560 | 1584 | -UGGUCGAUU---GUUAUGUGACGGU- | :|||||| ||| :|||||| | GGCCAGCUUUGGUCAA---GCUGCCAC |
| Dcun1d3 | mmu-miR-449b | 1561 | 1583 | -GGUCGA--UC-GUUACGUGACGGA | |||||| :| ||| :||||| | GCCAGCUUUGGUCAA---GCUGCCA |
| Dcun1d3 | mmu-miR-467* | 148 | 170 | GUAUAUGUACG---UCCGUGAAUG | :||| ||||: |||||||| | UGUAU-CAUGUUUUAGGCACUUU- |
| Dcun1d3 | mmu-miR-468 | 727 | 749 | GUCUGUGUG-CGUG--UAGUCAGUAU | ||::| |:|| :||||||| | ---UCAUGCUGUACCUGUCAGUCAA- |
| Dcun1d3 | mmu-miR-469 | 1432 | 1462 | CCUGUGGUUCU----AGUUACUUUCUCCGU | ||::|||:|: ||| :||||| | AGAUGCCAGGGAGCAUCAUAAACGGAGGCU |
| Dcun1d3 | mmu-miR-483 | 314 | 348 | -UGUUCUG-----------CCCUCCCCUCCUCACU | |:|:||: ||||||||||| ||| | GAUAGGAUUUGUUUUGUGGGGGAGGGGAGG-GUGU |
| Dcun1d3 | mmu-miR-484 | 332 | 356 | UAGCCCUCCCCUG--AC-UCGGACU- | ||||||||| || |||| |: | --GGGGAGGGGAGGGUGUAGCCCGGG |
| Dcun1d3 | mmu-miR-485-5p | 1548 | 1571 | CUUAAGU-AGUG---CCGGUCGGAGA | ||| || |||||||:|: | ---CUCACUCUACAAGGCCAGCUUUG |
| Dcun1d3 | mmu-miR-487b | 1678 | 1702 | -UCACCUACUG-----GGACAUGCUAA | |||||:||:| |:||||| | AAGUGGGUGGCAGGAGCUUGUACA--- |
| Dcun1d3 | mmu-miR-491 | 204 | 232 | -GGAGU--ACCUUC-CCA---AGGGGUGA | :||: ||| | || ||||| | | UUCUUUUUUGGGGGUGGGAAAUCCCC-CA |
| Dcun1d3 | mmu-miR-503 | 16 | 43 | -CGUCAUGACAA------GGGCGACGAU | |||| |||| ||:||||| | AGCAGCACUGAGGAUCUGCCUGCUGCC- |
| Dcun1d3 | mmu-miR-540 | 25 | 46 | GGUCCUAGCUGGA-GACUGGA- | |||||| :||| ||| ||| | -GAGGAUCUGCCUGCUGCCCUG |
| Dcun1d3 | mmu-miR-615 | 337 | 363 | -UUCUCCCUC--UGGGUCCGAGCCU- | ::||||| | :|||:||:| ||| | GGGGAGGGUGUAGCCCGGGUUGGGAG |
| Dcun1d3 | mmu-miR-666 | 2 | 41 | CCGAGAG--------UGUCG--AC------ACGGGCGA- | ||||| :|||| || ||||:||| | CGCUCUGUUCCAGGAGCAGCACUGAGGAUCUGCCUGCUG |
| Dcun1d3 | mmu-miR-667 | 1673 | 1703 | GAACCCG--ACCCACCGUCC----ACA-GU- | ||| ||||||||||| ||| || | -CUGGAAAGUGGGUGGCAGGAGCUUGUACAG |
| Dcun1d3 | mmu-miR-670 | 414 | 438 | -AAGUGGUGUAUGU--GAGUCCCUA | ||: ||:|| :|||||| | GUUUUGCAUAUUAUUUUUCAGGGC- |
| Dcun1d3 | mmu-miR-672 | 395 | 415 | GUGUGUGUCAUGUGGUUGGAGU- | |::||||:| | :|||||| | --GAUGCAGUGC-CAGACCUCAG |
| Dcun1d3 | mmu-miR-673 | 1579 | 1602 | GAGGU--UCCUGG---UCUCGACACUC | ||| :||:|| ||||||| | -GCCACUGGGGCCUGAAGAGCUGA--- |
| Dcun1d3 | mmu-miR-675-5p | 1137 | 1169 | -UGACACCCGGGAAAGG---------CGUGGU | |:|||| ||||| ||| ||:|| | AAUUGUGUGCCCUCUCCCUCUUUGCUGCGCCC |
| Dcun1d3 | mmu-miR-677 | 11 | 29 | AGUCUUCGAUUAGUAGUGACUU- | |||:||| ||||||: | CCAGGAGCAG-----CACUGAGG |
| Dcun1d3 | mmu-miR-678 | 8 | 30 | GGAGGUCA--GGAACGUGGCUCUG | :||||| | ||||:|||: | GUUCCAGGAGCA--GCACUGAGGA |
| Dcun1d3 | mmu-miR-679 | 588 | 620 | -UGGUUC---UCAGUG-----GAGUGUCAGG- | :||||| ||||| :|::|||||: | GGCCAAGGCCAGUCAAGAGCAUUUGCAGUCUG |
| Dcun1d3 | mmu-miR-680 | 1410 | 1440 | -GGGGGU---ACAG-----UCGUCUACGGG | ||::|| ||| || ||||||| | GCCUUCAAUCUGUAGUUUAAGAAGAUGCCA |
| Dcun1d3 | mmu-miR-687 | 2 | 18 | AGUAACGACGUAAGGUCCUAUC | ||| ::|||||||| | ----CGCUCUGUUCCAGGAG-- |
| Dcun1d3 | mmu-miR-688 | 953 | 980 | CUUAUUCAUCA----------GCGGACGCU | |::||:|| :|||||| | --CUGGGUGGUGAGAAAAGUGUGCCUGCC- |
| Dcun1d3 | mmu-miR-689 | 970 | 1006 | CCUGGGGCGG-C--------------UCGCCCCUGC | | ||:||| | ||||| |:| | UGUGCCUGCCAGCCGACCUGAAAGAAAGCGGUGGCA |
| Dcun1d3 | mmu-miR-693-3p | 1554 | 1582 | AAUG--UCGGUGUAGACU--UUCGACG- | ||| :|||| |:||: ||||||| | CUACAAGGCCAGCUUUGGUCAAGCUGCC |
| Dcun1d3 | mmu-miR-699 | 1559 | 1583 | GCUCGGU-----CCAGCGUGACGGA | :|||| |||| :||||| | -AGGCCAGCUUUGGUCAAGCUGCCA |
| Dcun1d3 | mmu-miR-700 | 332 | 358 | -CCA--CCUGAGCCAA---GGGCGCAC | || ||: ||| |||| || | GGGGAGGGGAG-GGUGUAGCCCGGGUU |
| Dcun1d3 | mmu-miR-702 | 328 | 347 | CUCGCCCCAUUUCCCACCCGU | |:|||| :|:||| |||: | -UGUGGGG-GAGGGGAGGGUG |
| Dcun1d3 | mmu-miR-707 | 1223 | 1248 | -GCA---UCCGUU-CGCCGUACUGAC- | || :||:|| |:||: ||||| | UCGGUUGGGGUAACGUGGU--GACUGU |
| Dcun1d3 | mmu-miR-709 | 33 | 52 | AGGAGGACGGAGACGGAGG- | ||| ||||| |||| || | GCCUGCUGCC-CUGCAGCCA |
| Dcun1d3 | mmu-miR-711 | 1565 | 1593 | -GAAUGUAGA--GA-GG-GGCCCAGGG- | ||| :|| || || |:||| ||: | GCUUUGGUCAAGCUGCCACUGGGGCCUG |
| Dcun1d3 | mmu-miR-714 | 1139 | 1176 | CGCUGGC--------------UGGC-CGGGAGCAGC- | :| :| :|:| |||| |||:| | UUGUGUGCCCUCUCCCUCUUUGCUGCGCCCACGUUGU |
| Dcun1d3 | mmu-miR-715 | 336 | 364 | GUGCGCC-CCCACA-------CGUGCCUC- | | || |||||| |: |||| | --AGGGGAGGGUGUAGCCCGGGUUGGGAGU |
| Dcun1d3 | mmu-miR-744 | 22 | 49 | CGACAAU----CGGGAU-CGGGGCGU- | ||| |||: ||||:||| | ACUGAGGAUCUGCCUGCUGCCCUGCAG |
| Dcun1d3 | mmu-miR-759 | 598 | 621 | -CAGUUUUAACAAACGUGAGACG | |||||:| |||||| |||| | AGUCAAGAGCAUUUGCAGUCUGA |
| Dcun1d3 | mmu-miR-761 | 25 | 43 | ACACAGUCAAAGUGGGACGACG- | || || |||||||| | -----GAGGAUCUGCCUGCUGCC |
| Dcun1d3 | mmu-miR-762 | 2 | 46 | -CGAGACAGGG--------------CCG----GGGU--CGGGG | |||||||:|| || ||: ||||: | CGCUCUGUUCCAGGAGCAGCACUGAGGAUCUGCCUGCUGCCCUG |
| Dcun1d3 | mmu-miR-764-3p | 1574 | 1593 | UGUCAACGGUGAUACCGGAGGA | || ||||||| ||||| | -AAGCUGCCACUGGGGCCUG-- |
| Dcun1d3 | mmu-miR-770-3p | 1561 | 1585 | -GGUCGAGGUGCAGUCCG--GGUGC | |||||| : |||| || |||| | GCCAGCU-UUGGUCAAGCUGCCACU |
| Dcun1d3 | mmu-miR-9 | 567 | 591 | GUAUGUCGA---UCUAUUGGUUUCU | |: |||| :|| |:||||:| | -UUGGAGCUCUUGGAGAGCCAAGGC |
| Dcun1d3 | mmu-miR-93 | 2 | 26 | GAUG-GACG---UGCUUGUCGUGAAAC | :| |||: | ||:||||||| | -CGCUCUGUUCCAGGAGCAGCACUG-- |
| Dcun1d3 | mmu-miR-96 | 389 | 410 | UCGUUUUUAC-ACGAUCACGGUUU- | |||||| ||| |||||||:| | ---CAAAAUGAUGC-AGUGCCAGAC |
| Dcun1d3 | mmu-miR-98 | 807 | 835 | UUGUUAUGUUGA-------AUGAUGGAGU- | |||:||: |:|||||||| | --GAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-miR-99b | 1220 | 1244 | GCGUUCCAGCCAAGAUGC-CCAC- | || |||:|| : ||| |||| | AGCUCGGUUGGGGUAACGUGGUGA |
| Dcun1d3 | mmu-let-7a | 826 | 833 | UGA---------------UAUGU------UGG-AUGAUGGAGU | ||:|| :| |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7b | 826 | 833 | -UUGGUGUG-------------------UUGG-AUGAUGGAGU | |||||| |:| |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7c | 826 | 833 | -UUGGUAUGUUGG--------------------AUGAUGGAGU | ||||| :|| | |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7d | 826 | 833 | UGA---------------UACGU------UGG-AUGAUGGAGA | ||||| :| |:||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCA |
| Dcun1d3 | mmu-let-7e | 826 | 833 | UGA---------------UAUGU------UGG-AGGAUGGAGU | ||:|| :| | |||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7f | 826 | 833 | UGAUA------------------------UGUUAGAUGAUGGAGU | :||: |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAG--UGCUACCUCAG |
| Dcun1d3 | mmu-let-7g | 826 | 833 | -------------UGAC--AUGUU-------UGAUGAUGGAGU | |:|| |:||: | |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7i | 826 | 833 | --------------------UGUCGUGUUUG--AUGAUGGAGU | :||| ||:| |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-miR-101a | 444 | 451 | --------------------GAAGUCAA---UAGUGUCAUGACAU | :||||| :|| |||||||: | CCUCAGUUUUGCAUAUUAUUUUUCAGGGCAGGUCU--GUACUGUGU |
| Dcun1d3 | mmu-miR-101b | 444 | 451 | --------------------GAAGUCGA---UAGUGUCAUGACAU | :||||| :|| |||||||: | CCUCAGUUUUGCAUAUUAUUUUUCAGGGCAGGUCU--GUACUGUGU |
| Dcun1d3 | mmu-miR-106a | 163 | 170 | AUG----------------GACGUG--ACAA---UCGUGAAAC | |||:|: |||| :||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUUUAGGCACUUUC |
| Dcun1d3 | mmu-miR-106b | 163 | 170 | UA-----------------GACGUG--ACAG---UCGUGAAAU | |||:|: |||: :||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUUUAGGCACUUUC |
| Dcun1d3 | mmu-miR-132 | 1242 | 1249 | -----------------GCUGGUACCG----ACAUCUGACAAU | ||: : ||: || ||||||| | UUUGUUAAUGUCAAGCUCGGUUGGGGUAACGUGGUGACUGUUU |
| Dcun1d3 | mmu-miR-141 | 525 | 532 | GGUAG---------AAAUG-GUC-----------UGUCACAAU | ||||| ||| :|||||||| | AUUAUUUUAAAAGAUUUACACAGAUAUGAAUAUAGCAGUGUUAA |
| Dcun1d3 | mmu-miR-146 | 1530 | 1537 | U-------------------UGGGUACCUUAA--GUCAAGAGU | :|| | |||: |||||||| | GAACAUGAAUGAAUUUGCUUGCCGAAGGAGGAACCAGUUCUCU |
| Dcun1d3 | mmu-miR-146b | 1530 | 1537 | U-------------------CGGAUACCUUAA--GUCAAGAGU | ||| |||: |||||||| | GAACAUGAAUGAAUUUGCUUGCCGAAGGAGGAACCAGUUCUCU |
| Dcun1d3 | mmu-miR-150 | 356 | 363 | GUGA------------------CCAUGUU---CCCAACCCUCU | |||::|: |||||||||| | UUUGUUUUGUGGGGGAGGGGAGGGUGUAGCCCGGGUUGGGAGU |
| Dcun1d3 | mmu-miR-17-5p | 163 | 170 | UGAUG--------------GACGUG--AC---AUUCGUGAAAC | |||:|: || ||:||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUUUAGGCACUUUC |
| Dcun1d3 | mmu-miR-193 | 594 | 601 | --------GACCCUGA-AACA-------------UCCGGUCAA | :||| || ||| |||||||| | CAGACAGUUUGGAGCUCUUGGAGAGCCAAGGCCAAGGCCAGUC |
| Dcun1d3 | mmu-miR-203 | 1714 | 1721 | GA--UCACC----------------------AGGAUUUGUAAAGU | :|||| ||| ||||||||: | AGUGGGUGGCAGGAGCUUGUACAGUUCAGCUUCC--AACAUUUCGG |
| Dcun1d3 | mmu-miR-20a | 163 | 170 | G---------------------AUGG-ACGUGAUAUUCGUGAAAU | ||:| ||: ||:||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUU--UAGGCACUUUC |
| Dcun1d3 | mmu-miR-20b | 163 | 170 | AUG----------------GACGUGAUAC-----UCGUGAAAC | |||:|: ||| :||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUUUAGGCACUUUC |
| Dcun1d3 | mmu-miR-212 | 1242 | 1249 | ------------------CCGGCAC---UG-ACCUCUGACAAU | ||::| || ||| ||||||| | UUUGUUAAUGUCAAGCUCGGUUGGGGUAACGUGGUGACUGUUU |
| Dcun1d3 | mmu-miR-217 | 396 | 403 | UAGGUCAGUCAAGG-----------------------ACUACGUCAU | ||| :||| : |||||||||: | ----AGUGGGUUGUUAGGUUGAAUUAACAUUACAAAAUGAUGCAGUGC |
| Dcun1d3 | mmu-miR-30b | 460 | 467 | UC--------------------GACUCACAUC-CUACAAAUGU | ||| |||||| | |||||||| | UAUUUUUCAGGGCAGGUCUGUACUGUGUGUAGUGCUGUUUACAU |
| Dcun1d3 | mmu-miR-30c | 460 | 467 | C---------------------GACUCUCACAUC-CUACAAAUGU | ||| |||||| | |||||||| | UAUUUUUCAGGGCAGGUCUGUACUGU--GUGUAGUGCUGUUUACAU |
| Dcun1d3 | mmu-miR-320 | 1563 | 1570 | AA----------------GCG-G-GAGAG--UUGGGUCGAAAA | :|| | |||| |: |||||||| | CCAGUUCUCUAGACUCCAUGCUCACUCUACAAGGCCAGCUUUG |
| Dcun1d3 | mmu-miR-335 | 572 | 579 | -------------------------UGUAAAAAGCAAUAACGAGAACU | ||| ||:| |||||||: | UUAGCCACAUUGCAUUAAUUUCCAGACAG--UUUGGA---GCUCUUGGA |
| Dcun1d3 | mmu-miR-409 | 1712 | 1719 | -UUC-CCCAAGUGG-CUC------------------GUUGUAAG | ||| |||| :| ||| |||||||: | AAAGUGGGUG-GCAGGAGCUUGUACAGUUCAGCUUCCAACAUUUC |
| Dcun1d3 | mmu-miR-680 | 1432 | 1439 | --------------GGGGGU---ACAG-----UCGUCUACGGG | ||::|| ||| || ||||||| | GAAAGAGGGAGCUGCCUUCAAUCUGUAGUUUAAGAAGAUGCCA |
| Dcun1d3 | mmu-miR-93 | 163 | 170 | G----------------AUGGAC--GUGCUUG--UCGUGAAAC | |:|: ||:| :||||||| | UUGAAAGGGCUCUAAAAUGCUGUAUCAUGUUUUAGGCACUUUC |
| Dcun1d3 | mmu-miR-98 | 826 | 833 | UUG--------------UUAUGUUGA-------AUGAUGGAGU | |||:||: |:|||||||| | AAACCACUUAAGCAUUGAAUGCAGAGAAAGCAGUGCUACCUCAG |
| Dcun1d3 | mmu-let-7a | 812 | 833 | ugaUAUGUUG-GAUGAUGGAGU | | | |:| |:|||||||| | cagAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7b | 811 | 833 | uuggUGUGUUG-GAUGAUGGAGU | | | |:| |:|||||||| | gcagAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7c | 811 | 833 | uuggUAUGUUG-GAUGAUGGAGU | | | |:| |:|||||||| | gcagAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7d | 815 | 833 | ugaUACGUUGGAUGAUGGAGa | | |||: |:||||||| | agaAAGCAG--TGCTACCTCa |
| Dcun1d3 | mmu-let-7e | 812 | 833 | ugaUAUGUUG-GAGGAUGGAGU | | | |:| | |||||||| | cagAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7e | 1597 | 1616 | uGAUAUGUUGGAGGAUGGAGU | ||: || : ||||||||:| | gCTG-ACTCTGTCCTACCTTA |
| Dcun1d3 | mmu-let-7f | 811 | 833 | ugauaugUUAG--AUGAUGGAGU | || | |:|||||||| | gcagagaAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7g | 811 | 833 | uGACAUGUUUG--AUGAUGGAGU | | | : ||:| |:|||||||| | gCAGAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-let-7i | 811 | 833 | uGUCGUGUUUG--AUGAUGGAGU | ||| : ||:| |:|||||||| | gCAGAGAAAGCAGTGCTACCTCA |
| Dcun1d3 | mmu-miR-1 | 666 | 687 | auguaUGAAGAA-AUGUAAGGu | ||||||| |||||| | ccctcACTTCTTGCTCATTCCt |
| Dcun1d3 | mmu-miR-101a | 429 | 451 | gAAGUCAAUAGU---GUCAUGACAu | ||||| : || | ||||||| | tTTCAG--GGCAGGTCTGTACTGTg |
| Dcun1d3 | mmu-miR-101b | 429 | 451 | gAAGUCGAUAGU---GUCAUGACAu | ||||| : || | ||||||| | tTTCAG--GGCAGGTCTGTACTGTg |
| Dcun1d3 | mmu-miR-103 | 129 | 151 | AGUAUCGGGACAUGUUACGACga | | | || || || ||||||| | TGAAAGGGCTCTAAAATGCTGta |
| Dcun1d3 | mmu-miR-106a | 144 | 170 | augGACGU-G-ACAA---UCGUGAAAc | |||:| | |||| :||||||| | atgCTGTATCATGTTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-106b | 145 | 170 | uaGACGU-G-ACAG---UCGUGAAAu | |||:| | |||: :||||||| | tgCTGTATCATGTTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-107 | 129 | 151 | ACUAUCGGGACAUGUUACGACga | ||| || || || ||||||| | TGAAAGGGCTCTAAAATGCTGta |
| Dcun1d3 | mmu-miR-130a | 1163 | 1180 | uaCGGGAAAAUUGUAAC-GUGAc | |||| ||:||| |||| | gcGCCC-----ACGTTGTCACTt |
| Dcun1d3 | mmu-miR-132 | 1224 | 1249 | GCUGGUACC---G-ACAUCUGACAAu | ||:::: || | || ||||||| | CGGTTGGGGTAACGTGGTGACTGTTt |
| Dcun1d3 | mmu-miR-135b | 563 | 588 | GUGUAUCCUU----ACUUUUCGGUau | || | |||: ||:|:||||| | CAGTTTGGAGCTCTTGGAGAGCCAag |
| Dcun1d3 | mmu-miR-138 | 1550 | 1567 | cUAAG-UGUUGUGGUCGA | | || |||| :|||||| | cACTCTACAAGGCCAGCT |
| Dcun1d3 | mmu-miR-141 | 499 | 532 | gguagAAAUG-GUCU-----------GUCACAAU | ||||| |||| |||||||| | aaagaTTTACACAGATATGAATATAGCAGTGTTA |
| Dcun1d3 | mmu-miR-144 | 431 | 451 | gaUCAUGUAGUAGAUAUGACAu | || :|| :|||:|||||| | tcAGGGCA-GGTCTGTACTGTg |
| Dcun1d3 | mmu-miR-146 | 1514 | 1537 | uuGGGUACCU--UAAGUCAAGAGu | || | ||| | |||||||| | tgCCGAAGGAGGAACCAGTTCTCt |
| Dcun1d3 | mmu-miR-146b | 1514 | 1537 | uCGGAUACCU--UAAGUCAAGAGu | ||| | ||| | |||||||| | tGCCGAAGGAGGAACCAGTTCTCt |
| Dcun1d3 | mmu-miR-149 | 334 | 354 | CCUCACUUCUGUGCCUCGGUCu | |||| |:||: ::| |||| | | GGAGGGGAGG-GTGTAGCCCGg |
| Dcun1d3 | mmu-miR-150 | 339 | 363 | gugaCCAUGUU---CCCAACCCUCu | |||::|: |||||||||| | ggagGGTGTAGCCCGGGTTGGGAGt |
| Dcun1d3 | mmu-miR-15b | 443 | 464 | ACAUUUGGUACUACACGACGAu | |||| ::|| ||||||:| | TGTACTGTGTGTAGTGCTGTTt |
| Dcun1d3 | mmu-miR-17-5p | 142 | 170 | ugaugGACGU-G-AC---AUUCGUGAAAc | |||:| | || ||:||||||| | aaatgCTGTATCATGTTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-193 | 581 | 601 | gacccugaaacaUCCGGUCAa | |||||||| | gagccaaggccaAGGCCAGTc |
| Dcun1d3 | mmu-miR-196a | 1393 | 1414 | GGU-UGUUGUACUUUGAUGGAu | ||| : || | |:|:||:||| | CCATGAAAGAGGGAGCTGCCTt |
| Dcun1d3 | mmu-miR-196b | 1393 | 1414 | GGU-UGUUGUCCUUUGAUGGAu | ||| : || |||:|:||:||| | CCATGAAAGAGGGAGCTGCCTt |
| Dcun1d3 | mmu-miR-199a | 1565 | 1587 | cuuguCCA--UCAGACUUGUGACCC | ||| || ||| ||||||| | gctttGGTCAAG-CTG-CCACTGGG |
| Dcun1d3 | mmu-miR-199a* | 1445 | 1467 | uUGGU-UACACGUCUGAUGACAU | |:|| | | ||:|||:|||| | cATCATAAACGGAGGCTATTGTA |
| Dcun1d3 | mmu-miR-199b | 1560 | 1587 | CUUGUC--CAUCAGAU---UUGUGACCC | |: ||| |:||| | : ||||||| | GGCCAGCTTTGGTCAAGCTGCCACTGGG |
| Dcun1d3 | mmu-miR-19a | 401 | 423 | agucaaaacguaUCUAAACGUGU | || ||||||:| | gtgccagacctcAGTTTTGCATA |
| Dcun1d3 | mmu-miR-200a | 543 | 570 | UGUAGC--AAU----GGUCUGUCACAau | ||||:| ||| ||||||||| | | ACATTGCATTAATTTCCAGACAGTTTgg |
| Dcun1d3 | mmu-miR-202 | 715 | 741 | aGAA-GGGUA----CGCGAUAUGGAga | ||| ||||| :|||:||||| | aCTTACCCATCATCATGCTGTACCTgt |
| Dcun1d3 | mmu-miR-206 | 667 | 687 | GGUGUG-UGAAGGAAUGUAAGGu | || ||| ||| || |||||| | CCTCACTTCTTGCT--CATTCCt |
| Dcun1d3 | mmu-miR-207 | 331 | 350 | CUCCCUCCUCUCGGUCCUCUUCG | |:||||||:||| || | ||| | GGGGGAGGGGAG---GGTGTAGC |
| Dcun1d3 | mmu-miR-20a | 149 | 170 | gAUGG-ACGUGAUAUUCGUGAAAu | ||:| || :| ||:||||||| | gTATCATG--TTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-20b | 144 | 170 | augGACGUGAUAC-----UCGUGAAAc | |||:|: ||| :||||||| | atgCTGTATCATGTTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-20b | 735 | 760 | AUGGAC-GUGA---UACUCGUGAAAc | |||||| || | :|||||| ||| | TACCTGTCAGTCAAGTGAGCAGTTTt |
| Dcun1d3 | mmu-miR-212 | 1230 | 1249 | CCGGCACUG-ACCUCUGACAAu | || || || ||| ||||||| | GG--GTAACGTGGTGACTGTTt |
| Dcun1d3 | mmu-miR-214 | 18 | 41 | GACG-GAC----AGACACGGACGACa | | || ||| || ||||||||| | CAGCACTGAGGATC--TGCCTGCTGc |
| Dcun1d3 | mmu-miR-216b | 922 | 950 | AGUGUAAACGGA----C-GUCUCUAAAGGg | |: ||||||||| | || || ||||| | TTTCATTTGCCTTGGAGCCAAAG-TTTCCg |
| Dcun1d3 | mmu-miR-217 | 380 | 403 | uaggucagucaaggACUACGUCAu | ||||||||| | ttaacattacaaaaTGATGCAGTg |
| Dcun1d3 | mmu-miR-223 | 1585 | 1603 | CCCCAUAAACUGUUUGACUGu | |||| ||| :|:||||| | GGGG--CCTGAAGAGCTGACt |
| Dcun1d3 | mmu-miR-224 | 1224 | 1247 | auuugCCUUGGUG-AUCACUGAau | ||::: || |:|||||| | cggttGGGGTAACGTGGTGACTgt |
| Dcun1d3 | mmu-miR-24 | 31 | 51 | GACAAGGACGACUUGAC-UCGGU | ||| ||||||| ||| ||||| | CTG--CCTGCTGCCCTGCAGCCA |
| Dcun1d3 | mmu-miR-24 | 6 | 30 | GACAAGG---ACGACUUGACUCggu | ||||||| || | |||||| | CTGTTCCAGGAGCAGCACTGAGgat |
| Dcun1d3 | mmu-miR-24* | 146 | 166 | uGACUAUAGU-CGAGUCAUCCGUG | ||| ||||| |:|: ||||||| | gCTG-TATCATGTTT--TAGGCAC |
| Dcun1d3 | mmu-miR-25 | 1059 | 1080 | agucuggcuCUGUUCACGUuac | |:|||||||| | tacttgtctGGCAAGTGCAgaa |
| Dcun1d3 | mmu-miR-291b-5p | 1555 | 1573 | cUCUCCCGGAGGUGAAACUAG | | | ||| | :|||||:|| | tACAAGGC--CAGCTTTGGTC |
| Dcun1d3 | mmu-miR-296 | 329 | 353 | uguCCUAACUCCCCCC----CGGGa | ||: |:|| ||| |||| | gtgGGGGAGGGGAGGGTGTAGCCCg |
| Dcun1d3 | mmu-miR-297 | 1282 | 1302 | guacgUGUACGUGUGUAUGUA | |||||:|:|:|||||| | cccagACATGTATATATACAT |
| Dcun1d3 | mmu-miR-297b | 1287 | 1306 | UGUACAAGUACGUGUGUAUGUA | |||||| || :|:|||||:|| | ACATGT--ATATATACATATAT |
| Dcun1d3 | mmu-miR-301b | 765 | 789 | ACGAAACUGUUAUG-GUAACGUGAC | ||:|||| :|: || |||||:|||| | TGTTTTGTTAGAACACATTGTACTG |
| Dcun1d3 | mmu-miR-302 | 587 | 612 | aguGGUUUUGUAC---CUUCGUGAAu | ||||::| | :||||:|| | aggCCAAGGCCAGTCAAGAGCATTTg |
| Dcun1d3 | mmu-miR-30a-3p | 974 | 993 | cGACGUUUGUAGGCU-GACUUUC | |||| || |||| ||||||| | cCTGC---CAGCCGACCTGAAAG |
| Dcun1d3 | mmu-miR-30b | 445 | 467 | ucGACUCACAUC-CUACAAAUGU | ||| |||||| | |||||||| | taCTGTGTGTAGTGCTGTTTACA |
| Dcun1d3 | mmu-miR-30c | 441 | 467 | cGAC-U--CUCACAUC-CUACAAAUGU | ||| | | |||||| | |||||||| | tCTGTACTGTGTGTAGTGCTGTTTACA |
| Dcun1d3 | mmu-miR-30e* | 975 | 993 | GACAUUUGUAGGCU-GACUUUC | ||| || |||| ||||||| | CTG---CCAGCCGACCTGAAAG |
| Dcun1d3 | mmu-miR-31 | 396 | 422 | guCGAUACGGUC----GU-AGAACGga | || :|||||| || |:|||| | atGCAGTGCCAGACCTCAGTTTTGCat |
| Dcun1d3 | mmu-miR-320 | 1544 | 1570 | aagCGGGAGAGUUG----GGUCGAAAa | ||:| ||| || |||||||| | catGCTCACTCTACAAGGCCAGCTTTg |
| Dcun1d3 | mmu-miR-323 | 431 | 452 | ucUCCAG-CUGGCACAUUACACg | ||| | |::| |||| |||| | tcAGGGCAGGTC-TGTACTGTGt |
| Dcun1d3 | mmu-miR-324-3p | 978 | 1003 | GGUCGUCGUGGAC---C--CCGUCACC | ||||| | ||||| | ||:|||| | CCAGCCG-ACCTGAAAGAAAGCGGTGG |
| Dcun1d3 | mmu-miR-326 | 336 | 357 | ugaCCUCCUUC-CCGGGUCucc | |||||: | ||||:| | aggGGAGGGTGTAGCCCGGgtt |
| Dcun1d3 | mmu-miR-329 | 338 | 366 | uuuUUCCA-AUCG------ACCCACACaa | |:||| |||| |||| ||| | gggAGGGTGTAGCCCGGGTTGGGAGTGgg |
| Dcun1d3 | mmu-miR-331 | 337 | 360 | aagaUCCUAU-CCGGGUCC--CCg | |||:|: ||||:|| || | ggggAGGGTGTAGCCCGGGTTGGg |
| Dcun1d3 | mmu-miR-335 | 548 | 579 | uGUAA--AAAG------C-AAUAACGAGAACu | |||| |||| | ||: ||||||| | gCATTAATTTCCAGACAGTTTGGAGCTCTTGg |
| Dcun1d3 | mmu-miR-338 | 1069 | 1093 | aGUU---GUUUUAGUGACUACGACCu | ||| ||:|| | |||| ||||| | gCAAGTGCAGAAGC-CTGAGGCTGGc |
| Dcun1d3 | mmu-miR-341 | 968 | 989 | UGAC-UGGCUGGCUGGCUAGcu | | || :|| :|| :|||| | | AGTGTGCCTGCCAGCCGACCtg |
| Dcun1d3 | mmu-miR-342 | 339 | 367 | CUGCCCAC-----GCUAAAGACACACUCu | |: ||||| ||: || | |||:| | GGAGGGTGTAGCCCGGGTTGGGAGTGGGt |
| Dcun1d3 | mmu-miR-342 | 314 | 336 | CUG-CCCACGCUAAAGACACACUCU | ||: || | :| ||:|||| |:|| | GATAGGATTTG--TTTTGTGGGGGA |
| Dcun1d3 | mmu-miR-34b | 1557 | 1583 | GUU--AGUCG--AUUAAUGUGACGGau | ||| |||| |::| | :||||| | CAAGGCCAGCTTTGGTCAAGCTGCCac |
| Dcun1d3 | mmu-miR-376a* | 11 | 35 | gaguaUCUUC----CUCUUAGAUGG | || || |||:||||:|| | ccaggAGCAGCACTGAGGATCTGCC |
| Dcun1d3 | mmu-miR-378 | 342 | 362 | uguguccuGGACCUCAGUCCUC | || || ||::|||| | gggtgtagCCCGG-GTTGGGAG |
| Dcun1d3 | mmu-miR-380-5p | 522 | 543 | cgCGU-ACAA--GAUACCAGUUGGU | ||| |||| || ||:|:||| | taGCAGTGTTAACT---GTTAGCCA |
| Dcun1d3 | mmu-miR-409 | 1697 | 1719 | uucccCAAGUGGCUCGUUGUAAg | ||||| | ||||||| | gtacaGTTCAGCTTCCAACATTt |
| Dcun1d3 | mmu-miR-411 | 337 | 357 | ugaCUCCCAAUCACCUGGCACAA | |||||| || | ||| ||| | gggGAGGGT--GTAGCCCGGGTT |
| Dcun1d3 | mmu-miR-412 | 1223 | 1246 | uGCCGAUCACCUGGU-CCACUuca | |||:|:| | | |: ||||| | tCGGTTGGGGTAACGTGGTGActg |
| Dcun1d3 | mmu-miR-422b | 1606 | 1633 | CCGGA-AGACUGAGG----UUCA-GGUc | | ||| || |:||| |||| ||| | GTCCTACCTTATTCCACTAAAGTACCAt |
| Dcun1d3 | mmu-miR-424 | 10 | 43 | AGGUU----UUGU-ACU--UA-----ACGACGac | ||||: |:|| ||| || |||||| | TCCAGGAGCAGCACTGAGGATCTGCCTGCTGCcc |
| Dcun1d3 | mmu-miR-429 | 545 | 570 | UGCCGUAAU----GGUCUGUCAUAau | |: |||||| ||||||||| | | ATTGCATTAATTTCCAGACAGTTTgg |
| Dcun1d3 | mmu-miR-434-3p | 359 | 380 | CCUCAGCUCACUA-CCAAGUUu | ||||| |: || | |||| || | GGAGTGGGTTGTTAGGTTGAAt |
| Dcun1d3 | mmu-miR-449 | 1561 | 1582 | uGGUCGAUUGUUAUGU--GACGGU | |||||| :::| || |||||| | gCCAGCT-TTGGT-CAAGCTGCCA |
| Dcun1d3 | mmu-miR-449b | 1562 | 1591 | GGUCG--AUC-GUU--AC-GUGA---CGGA | ||||| |:| ||| || |||| |||| | CCAGCTTTGGTCAAGCTGCCACTGGGGCCT |
| Dcun1d3 | mmu-miR-467* | 146 | 170 | guAUAU-GUAC---GUCCGUGAAug | |:|| |||| :|||||||| | gcTGTATCATGTTTTAGGCACTTtc |
| Dcun1d3 | mmu-miR-468 | 724 | 749 | gucuGUGUG-CGUG--UAGUCAGUau | ||::| |:|| :||||||| | tcatCATGCTGTACCTGTCAGTCAag |
| Dcun1d3 | mmu-miR-483 | 331 | 365 | uguuCUGCCCUC----------CCC--UCCUCACu | || ||||| ||| :|||||| | ggggGAGGGGAGGGTGTAGCCCGGGTTGGGAGTGg |
| Dcun1d3 | mmu-miR-483 | 307 | 340 | UGUU---CUGCCCU--------CCCCUCCUCACu | |||| ||: ||| | ||:|||| | | ACAACTTGATAGGATTTGTTTTGTGGGGGAGGGg |
| Dcun1d3 | mmu-miR-484 | 330 | 354 | uagCCCUCCCCU--GAC-UCGGACu | ||||||||| || |||| | | tggGGGAGGGGAGGGTGTAGCCCGg |
| Dcun1d3 | mmu-miR-485-5p | 1549 | 1570 | cuUAAGUAGUGCCGGUCGGAga | | || || |||||||:| | tcACTCTACAAGGCCAGCTTtg |
| Dcun1d3 | mmu-miR-486 | 430 | 451 | gAGCCCCGUCGAGUCAUGUCcu | || |||||| || |||| | | tTCAGGGCAGGTCTGTACTGtg |
| Dcun1d3 | mmu-miR-487b | 1679 | 1704 | UCACCUACUG-----GGACAUGCUAA | |||||:||:| |:||||| :|| | AGTGGGTGGCAGGAGCTTGTACAGTT |
| Dcun1d3 | mmu-miR-491 | 209 | 232 | ggAGUACCUUCCC--AAGGGGuga | |:: ||: ||| ||||| | ttTTGGGGGTGGGAAATCCCCcaa |
| Dcun1d3 | mmu-miR-497 | 435 | 464 | auGUUUGG---UGUCA-----CACGACGAc | ||:::| || || ||||||:| | ggCAGGTCTGTACTGTGTGTAGTGCTGTTt |
| Dcun1d3 | mmu-miR-503 | 17 | 43 | CGUCAUGAC------AAGGGCGACGau | |||| |||| | ||:||||| | GCAGCACTGAGGATCTGCCTGCTGCcc |
| Dcun1d3 | mmu-miR-540 | 24 | 44 | ggUCCUAGCUGGA-GACUGGA | |||||| :||| ||| ||| | tgAGGATCTGCCTGCTGCCCT |
| Dcun1d3 | mmu-miR-615 | 338 | 361 | uuCUCCCUC--UGGGUCCGAGCCU | ||||| | :|||:||:| ||| | ggGAGGGTGTAGCCCGGGTTGGGA |
| Dcun1d3 | mmu-miR-666 | 19 | 39 | cCGAGAGUGUCGACACGGGCGA | || || | :| | ||||:||| | aGCACTGA-GGATCTGCCTGCT |
| Dcun1d3 | mmu-miR-667 | 1667 | 1689 | gaACCCGACCCACCGUCCACAGU | || |||| |::|||| || | aaTGTACTGGAAAGTGGGTGGCA |
| Dcun1d3 | mmu-miR-670 | 415 | 438 | AAGUGGUGU-AU-GUGAGUCCCua | ||: ||:| || : :|||||| | TTTTGCATATTATTTTTCAGGGca |
| Dcun1d3 | mmu-miR-672 | 393 | 413 | gugUGUGUCAUGUGGU-UGGAGU | |::|||| :||| |||||| | atgATGCAGT--GCCAGACCTCA |
| Dcun1d3 | mmu-miR-673 | 1577 | 1604 | GA-GGU--UCCUGG---UCUCGACacuc | || ||| :||:|| ||||||| | CTGCCACTGGGGCCTGAAGAGCTGactc |
| Dcun1d3 | mmu-miR-675-5p | 1138 | 1168 | UGACACCCGG--------GAAA-GGCGUGGu | |:|||| ||| |||| |:||:|| | ATTGTGTGCCCTCTCCCTCTTTGCTGCGCCc |
| Dcun1d3 | mmu-miR-679 | 599 | 618 | ugGUUCUCAGUGGAGUGUCAGg | |||||| || :|::||||| | gtCAAGAG-CA-TTTGCAGTCt |
| Dcun1d3 | mmu-miR-680 | 1411 | 1439 | GGGGGU---AC-----AGUCGUCUACGGg | ||::|| || | || ||||||| | CCTTCAATCTGTAGTTTAAGAAGATGCCa |
| Dcun1d3 | mmu-miR-680 | 1390 | 1413 | gggGGUACAGU---CGUCUACGGg | ||||| | | || |||| | tggCCATGAAAGAGGGAGCTGCCt |
| Dcun1d3 | mmu-miR-687 | 1 | 19 | aguaaCGACGUAAGGUCCUauc | ||| ::|||||||| | ---ccGCTCTGTTCCAGGAgca |
| Dcun1d3 | mmu-miR-688 | 964 | 980 | CUUAUUCAUCAGCGGACGcu | ||| |||| || |||||| | GAA-AAGT-GT-GCCTGCca |
| Dcun1d3 | mmu-miR-689 | 983 | 1005 | cCUGGGGCGGC--UCGCCCCUGc | ||||: | ||||| |:| | cGACCTGAAAGAAAGCGGTGGCa |
| Dcun1d3 | mmu-miR-693-3p | 1574 | 1601 | aauGUCGGUG----UAGAC-UUUCGACg | | ||||| : ||| |:||||| | aagCTGCCACTGGGGCCTGAAGAGCTGa |
| Dcun1d3 | mmu-miR-699 | 1558 | 1582 | gcuCGGUCCAG--C-GU--GACGGa | ||||| |: | || ||||| | aagGCCAGCTTTGGTCAAGCTGCCa |
| Dcun1d3 | mmu-miR-700 | 334 | 357 | CCACCUGAGCCA-A--GGGCGCAc | || ||: ||| | |||| || | GGAGGGGAGGGTGTAGCCCGGGTt |
| Dcun1d3 | mmu-miR-702 | 327 | 346 | cuCGCCCCAUUUCCCACCCgu | |:|||| :|:||| ||| | ttGTGGGG-GAGGGGAGGGtg |
| Dcun1d3 | mmu-miR-707 | 1236 | 1264 | GCAUCCGUU--CG---CC----GUACUGac | ||| ||::| |: || |||||| | CGT-GGTGACTGTTTAGGTTTACATGACcc |
| Dcun1d3 | mmu-miR-709 | 26 | 45 | aggagGACGGA-GACGGagg | |||||| ||||| | aggatCTGCCTGCTGCCctg |
| Dcun1d3 | mmu-miR-711 | 1566 | 1591 | GAAUGUAG--AGA-GG-GGCCCAGGg | ||| :|| || || |:||| || | CTTTGGTCAAGCTGCCACTGGGGCCt |
| Dcun1d3 | mmu-miR-714 | 1153 | 1174 | cgcuggcuGGC-CGGGAGCAGC | |:| |||| |||:| | cctctttgCTGCGCCCACGTTG |
| Dcun1d3 | mmu-miR-715 | 335 | 356 | gUGCGCCCCCACA-CGUGCCuc | | | | |||||| || ||| | gAGGGGAGGGTGTAGCCCGGgt |
| Dcun1d3 | mmu-miR-744 | 26 | 47 | cgacaauCGG--GAUCGGGGCGU | ||| || ||||:||| | aggatctGCCTGCT-GCCCTGCA |
| Dcun1d3 | mmu-miR-759 | 599 | 620 | CAGUUUUAACAAACGUGAGACg | |||||:| |||||| |||| | GTCAAGAGCATTTGCAGTCTGa |
| Dcun1d3 | mmu-miR-761 | 20 | 41 | acacAGUCAAAGUGGGACGACG | | || || |||||||| | gcacTGAGGATCTGCCTGCTGC |
| Dcun1d3 | mmu-miR-762 | 28 | 52 | CGAGACAGGGC--CGGG--GUCGGgg | | |||| ||:| |||| ||||| | GATCTG-CCTGCTGCCCTGCAGCCaa |
| Dcun1d3 | mmu-miR-762 | 3 | 24 | CGAGACAGGGCCGGGGUCGGGg | |||||||:|| | |||| | | GCTCTGTTCCAGGAGCAGCACt |
| Dcun1d3 | mmu-miR-764-3p | 1573 | 1594 | ugUCAACGGUGAUACCGGAgga | || |||||||: ||||| | caAGCTGCCACTGGGGCCTgaa |
| Dcun1d3 | mmu-miR-770-3p | 1543 | 1567 | GGU-CGAG-GUGCAG-UCCGGGUGc | ||| |||| | | | ||||| :| | CCATGCTCACTCTACAAGGCCAGCt |
| Dcun1d3 | mmu-miR-770-3p | 1573 | 1594 | GGUCGA-GGUGCAGUCCGGgugc | | |||| |||| | :|||| | CAAGCTGCCAC-TGGGGCCtgaa |
| Dcun1d3 | mmu-miR-9 | 566 | 590 | guAUGUCG---AUCUAUUGGUUUCu | |: ||| |:|| |:||||:| | ttTGGAGCTCTTGGAGAGCCAAGGc |
| Dcun1d3 | mmu-miR-93 | 143 | 170 | gaugGAC---GUGCUUG--UCGUGAAAc | ||| ||:| : :||||||| | aatgCTGTATCATGTTTTAGGCACTTTc |
| Dcun1d3 | mmu-miR-93 | 1 | 27 | GAUG-GAC---GUGCUUGUCGUGAaac | | :| ||| || ||:||||||| | CCGCTCTGTTCCAGGAGCAGCACTgag |
| Dcun1d3 | mmu-miR-96 | 386 | 408 | ucguUUUUAC-ACGAUCACGGUUU | |||||| ||| |||||||:| | ttacAAAATGATGC-AGTGCCAGA |
| Dcun1d3 | mmu-miR-98 | 814 | 833 | uUGUUAUGUUGAAUGAUGGAGU | | || :||: |:|||||||| | gAGAAAGCAG--TGCTACCTCA |
| Dcun1d3 | mmu-miR-99b | 1216 | 1242 | gcGUUCCAGCCAA----GAUGC-CCAC | |||| |||||| : ||| |||| | gtCAAGCTCGGTTGGGGTAACGTGGTG |