DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 45343 pk ucagcguccGAGGUGAAUUUAUAAAu || :|: | |||||| cuaauugaaCUAUAUACAUAUAUUUu 2 18 320 345 [dm3:2R:3110644-3110669:+] 0.5926 121 6 -5.78 -0.2000 MIMAT0000364 dme-miR-289 45343 pk ucAGCGUCCGAGGUGAAUUUAUAAAu |: :| ||::|:| |||||| auUUAUACACUUUAUU--UAUAUUUa 2 25 390 413 [dm3:2R:3110714-3110737:+] 0.5266 121 6 -10.35 -0.2391 MIMAT0005509 dme-miR-991 45343 pk ugaaaGGUUUGAUGU-UGAAAUu || | :||:| |||||| auaacCCUAUUUAUACACUUUAu 2 18 382 404 [dm3:2R:3110706-3110728:+] 0.5266 125 6 -9.20 -1.2428 MIMAT0011784 dme-miR-2279* 45343 pk uuAAAGUGUG---UGUCUAUAAAUu || :|||| |: ||||||| auUUAUACACUUUAUUUAUAUUUAu 2 21 390 414 [dm3:2R:3110714-3110738:+] 0.5266 151 7 -12.15 -1.1591 MIMAT0011784 dme-miR-2279* 45343 pk uuaaaGUGUGUGUCUAUAAAuu :|:|:||| |||||| ugaacUAUAUACAUAUAUUUuu 3 18 325 346 [dm3:2R:3110649-3110670:+] 0.5926 145 0 -10.77 -0.1644 MIMAT0011786 dme-miR-2280 45343 pk uauaaaauAACGGUUCGAUUcu | |::||||||| cacaucccUAGUUAAGCUAAuu 3 15 304 325 [dm3:2R:3110628-3110649:+] 0.5926 134 0 -10.37 -0.1091 MIMAT0011788 dme-miR-2281* 45343 pk aaCGUAGACGUCGACGUCUAUUa | | | || :||||||||| gcGAAGAUACA-UUGCAGAUAAc 2 22 365 386 [dm3:2R:3110689-3110710:+] 0.5266 155 7 -13.71 -0.5863 MIMAT0011791 dme-miR-2283 45343 pk uaacagcAUAAGUACUAUAAAAg ||| ||| ||||||| ugaacuaUAUACAU-AUAUUUUu 2 17 325 346 [dm3:2R:3110649-3110670:+] 0.5926 158 7 -6.19 -1.2128 MIMAT0012196 dme-miR-2489 45343 pk ugaCGUUUAUGUUG-UAUGUUAu || |||: ||| |||||| uggGCUAAUGAAACUCUACAAUa 2 20 480 502 [dm3:2R:3110804-3110826:+] 0.5266 134 6 -12.19 -0.1279 MIMAT0012196 dme-miR-2489 45343 pk ugaCGUUUA---UGUUGUAUGU-UAu || ||| || |:||||| || uaaGCUAAUUGAACUAUAUACAUAUa 2 20 316 341 [dm3:2R:3110640-3110665:+] 0.5926 122 0 -10.18 -1.3020 MIMAT0000332 dme-miR-274 45343 pk uaauGGGCAAUCACA-GCCAGUGUUUu |: |||| || | ||||||| gcgcCUAGUUAAGGUACACUCACAAAc 2 23 218 244 [dm3:2R:3110542-3110568:+] 0.5926 157 7 -16.01 -0.5095 MIMAT0000347 dme-miR-283 45343 pk ucuuaauggucgacUAUAAAu |||||| ugaacuauauacauAUAUUUu 2 8 325 345 [dm3:2R:3110649-3110669:+] 0.5926 120 6 -3.18 -0.2018 MIMAT0000347 dme-miR-283 45343 pk ucuuaauggucgacUAUAAAu |||||| uauacacuuuauuuAUAUUUa 2 8 393 413 [dm3:2R:3110717-3110737:+] 0.5266 120 6 -4.08 -0.2585 MIMAT0000390 dme-miR-304 45343 pk gagUGUAAAUGUUUA--ACU-CUAAu |:| || |||| ||| |||| caaAUAAGUAGAAAUGCUGACGAUUg 2 21 456 481 [dm3:2R:3110780-3110805:+] 0.5266 123 0 -7.88 -0.4183 MIMAT0005467 dme-miR-190 45343 pk guUGGUU--CUU-AUAGUUUGUAUAga :|:|| ||| ||| | |||||| aaGCUAAUUGAACUAU-AUACAUAUau 3 23 317 342 [dm3:2R:3110641-3110666:+] 0.5926 138 0 -10.24 -0.2285 MIMAT0005506 dme-miR-989 45343 pk caaGGUGAUGCAGUGU-AGUGu :||||:: | ||| |||| aaaUCACUGUAUGACAUUCACg 2 19 517 538 [dm3:2R:3110841-3110862:+] 0.6096 126 0 -18.16 -1.0606 MIMAT0005519 dme-miR-999 45343 pk ucUGUGUCAGAAUGUCAAUUgu ||||| | | |||||| auACACAUCCCU--AGUUAAgc 3 21 301 320 [dm3:2R:3110625-3110644:+] 0.5926 133 0 -12.05 -0.1033