DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 174050 lgg-1 acguGGACAUGGACGAAG-GUAc :|||||::| |||| ||| uaauUCUGUAUUUCCUUCACAUu 2 19 109 131 [ce6:II:6347083-6347105:-] 0.5444 134 0 -16.69 -0.9916 MIMAT0015099 cel-miR-51* 174050 lgg-1 acguGGACAUGGACGAAG-GUAc :|||||::| |||| ||| uaauUCUGUAUUUCCUUCACAUu 2 19 109 131 [ce6:II:6347083-6347105:-] 0.5444 134 0 -16.69 -0.9970 MIMAT0000027 cel-miR-56* 174050 lgg-1 auguuggguuuuaccUAGGCGGu ||||||| --agugucauguauuAUCCGCCg 2 9 1 21 [ce6:II:6347193-6347213:-] 0.5444 140 7 -16.68 -0.8647 MIMAT0000027 cel-miR-56* 174050 lgg-1 auguuggguuuuaccUAGGCGGu ||||||| --agugucauguauuAUCCGCCg 2 9 1 21 [ce6:II:6347193-6347213:-] 0.5444 140 7 -16.68 -0.9257 MIMAT0015110 cel-miR-84* 174050 lgg-1 cgGCUCAA-UCAACUUUG-UAACAc :|| || || |||| ||||| agUGACUUCUAUUCAAACUAUUGUc 2 22 166 190 [ce6:II:6347024-6347048:-] 0.5444 124 0 -5.25 -0.8160 MIMAT0015110 cel-miR-84* 174050 lgg-1 cgGCUCAA-UCAACUUUG-UAACAc :|| || || |||| ||||| agUGACUUCUAUUCAAACUAUUGUc 2 22 166 190 [ce6:II:6347024-6347048:-] 0.5444 124 0 -5.25 -0.8233 MIMAT0015119 cel-miR-247* 174050 lgg-1 ccauuaaucuuugAAAAGAGAu |||||||| ccagaaaaucaugUUUUCUCUc 2 10 214 235 [ce6:II:6346979-6347000:-] 0.5444 145 7 -9.70 -0.7242 MIMAT0015119 cel-miR-247* 174050 lgg-1 ccauuaaucuuugAAAAGAGAu |||||||| ccagaaaaucaugUUUUCUCUc 2 10 214 235 [ce6:II:6346979-6347000:-] 0.5444 145 7 -9.70 -0.6713 MIMAT0000324 cel-miR-268 174050 lgg-1 ugGUUUGACGAAGAU-UAAGAACGg |::|:| :| || ||:|||| cuCGGAUU-UUGAUAUUUUUUUGCu 2 23 233 256 [ce6:II:6346958-6346981:-] 0.5444 131 0 -11.55 -0.1037 MIMAT0015239 cel-miR-786* 174050 lgg-1 cauuuauGGGGUU--GACUAUAAGc |:| :| :|||||||: guuuucuCUCGGAUUUUGAUAUUUu 2 17 226 250 [ce6:II:6346964-6346988:-] 0.5444 131 0 -11.51 -0.1394 MIMAT0015239 cel-miR-786* 174050 lgg-1 cauuuauGGGGUU--GACUAUAAGc |:| :| :|||||||: guuuucuCUCGGAUUUUGAUAUUUu 2 17 226 250 [ce6:II:6346964-6346988:-] 0.5444 131 0 -11.51 -0.1298 MIMAT0005033 cel-miR-1020 174050 lgg-1 gacuuucacaguguCUUAUUa |||||| aauuuuugauucauGAAUAAa 2 8 267 287 [ce6:II:6346927-6346947:-] 0.5444 120 6 -7.64 -0.1069 MIMAT0006590 cel-miR-1823 174050 lgg-1 aauGAGGAU-UUGUGAAGG-UCAu ||| || :||: |||| ||| uuuCUCGUAUGACGGUUCCGAGUa 2 20 143 166 [ce6:II:6347048-6347071:-] 0.5444 126 0 -19.19 -0.8752 MIMAT0006590 cel-miR-1823 174050 lgg-1 aauGAGGAU-UUGUGAAGG-UCAu ||| || :||: |||| ||| uuuCUCGUAUGACGGUUCCGAGUa 2 20 143 166 [ce6:II:6347048-6347071:-] 0.5444 126 0 -19.19 -0.8821 MIMAT0006771 cel-miR-1829c 174050 lgg-1 auguuggUAGAACU-U---AAAGCGAa ||:|||| | |||:||| cucucggAUUUUGAUAUUUUUUUGCUa 2 17 231 257 [ce6:II:6346957-6346983:-] 0.5444 134 0 -11.43 -0.1487 MIMAT0006771 cel-miR-1829c 174050 lgg-1 auguuggUAGAACU-U---AAAGCGAa ||:|||| | |||:||| cucucggAUUUUGAUAUUUUUUUGCUa 2 17 231 257 [ce6:II:6346957-6346983:-] 0.5444 134 0 -11.43 -0.1119 MIMAT0011447 cel-miR-2216 174050 lgg-1 cgGAUGGCUGAAUUUUACACg | :||||| :|||||| auCCGCCGAC---GAAUGUGu 2 20 14 31 [ce6:II:6347183-6347200:-] 0.5444 135 6 -20.57 -0.2314 MIMAT0011447 cel-miR-2216 174050 lgg-1 cgGAUGGCUGAAUUUUACACg | :||||| :|||||| auCCGCCGAC---GAAUGUGu 2 20 14 31 [ce6:II:6347183-6347200:-] 0.5444 135 6 -20.57 -0.2199 MIMAT0011458 cel-miR-2218b* 174050 lgg-1 agAGUGAUGUUUGAUGUUUAAa |::|||: | :| |||||| uuUUGCUAUUACUUUCAAAUUu 2 21 250 271 [ce6:II:6346943-6346964:-] 0.5444 136 6 -11.21 -0.1628 MIMAT0011458 cel-miR-2218b* 174050 lgg-1 agAGUGAUGUUUGAUGUUUAAa |::|||: | :| |||||| uuUUGCUAUUACUUUCAAAUUu 2 21 250 271 [ce6:II:6346943-6346964:-] 0.5444 136 6 -11.21 -0.1793 MIMAT0014446 cel-miR-2953-5p 174050 lgg-1 uaAAAGUGCUUGUGAAGACAu |||| ||:| |||||| auUUUCUGUAAUAAUUCUGUa 2 20 98 118 [ce6:II:6347096-6347116:-] 0.5444 135 6 -14.61 -0.4285 MIMAT0014446 cel-miR-2953-5p 174050 lgg-1 uaAAAGUGCUUGUGAAGACAu |||| ||:| |||||| auUUUCUGUAAUAAUUCUGUa 2 20 98 118 [ce6:II:6347096-6347116:-] 0.5444 135 6 -14.61 -0.4343 MIMAT0000035 cel-miR-63 174050 lgg-1 aaagguugagcgaagUCACAGUAu |||||||| ---------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -11.70 -0.5764 MIMAT0000035 cel-miR-63 174050 lgg-1 aaagguugagcgaagUCACAGUAu |||||||| ---------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -11.70 -0.6744 MIMAT0000036 cel-miR-64 174050 lgg-1 aagccauugcgaagUCACAGUAu |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -12.89 -0.5764 MIMAT0000036 cel-miR-64 174050 lgg-1 aagccauugcgaagUCACAGUAu |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -12.89 -0.6744 MIMAT0000037 cel-miR-65 174050 lgg-1 aagccaaugcgaagUCACAGUAu |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -12.89 -0.5764 MIMAT0000037 cel-miR-65 174050 lgg-1 aagccaaugcgaagUCACAGUAu |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -12.89 -0.6744 MIMAT0000038 cel-miR-66 174050 lgg-1 aguguagggauuagUCACAGUAc |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -13.81 -0.5764 MIMAT0000038 cel-miR-66 174050 lgg-1 aguguagggauuagUCACAGUAc |||||||| --------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -13.81 -0.6744 MIMAT0000058 cel-miR-85 174050 lgg-1 cgUGCUGAAAAGUUUAUGA-AACAu || || ||||| ||| |||| ugACUUCUAUUCAA--ACUAUUGUc 2 23 168 190 [ce6:II:6347024-6347046:-] 0.5444 127 0 -11.48 -0.7808 MIMAT0000058 cel-miR-85 174050 lgg-1 cgUGCUGAAAAGUUUAUGA-AACAu || || ||||| ||| |||| ugACUUCUAUUCAA--ACUAUUGUc 2 23 168 190 [ce6:II:6347024-6347046:-] 0.5444 127 0 -11.48 -0.7882 MIMAT0000284 cel-miR-229 174050 lgg-1 gcuaccuuuucuauuggUCACAGUAa |||||||| -----------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -9.92 -0.5764 MIMAT0000284 cel-miR-229 174050 lgg-1 gcuaccuuuucuauuggUCACAGUAa |||||||| -----------------AGUGUCAUg 2 10 1 9 [ce6:II:6347205-6347213:-] 0.5444 145 7 -9.92 -0.6744 MIMAT0000697 cel-miR-355 174050 lgg-1 guaucgaguccgauUUUGUUu |||||| aacgaagaagacacAAACAAa 2 8 286 306 [ce6:II:6346908-6346928:-] 0.5406 120 6 -8.70 -0.2576

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score lgg-1 RAID00093201 cel-miR-229-5p miRNA MIMAT0000284 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID01302571 cel-miR-66-5p miRNA MIMAT0000038 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID02103304 cel-miR-65-5p miRNA MIMAT0000037 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID02335295 cel-miR-355-5p miRNA MIMAT0000697 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID02969810 cel-miR-64-5p miRNA MIMAT0000036 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID03401668 cel-miR-63-3p miRNA MIMAT0000035 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308 lgg-1 RAID03594340 cel-miR-85-3p miRNA MIMAT0000058 lgg-1 mRNA 174050 CLIP-seq//Prediction 0.6308