DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015091 cel-let-7* 181527 sym-4 cauuccaucUUUUA-ACGUAUCAAgu | :|| | |||||| ucaaaccgcACGAUGUCAAUAGUUaa 3 17 134 159 [ce6:X:14164818-14164843:-] 0.4202 123 0 -4.42 -0.1113 MIMAT0015103 cel-miR-61* 181527 sym-4 ccuGAU-UCGGGGCAUUGGGu ||: || :: ||||||| uuuCUGCAG-UUGGUAACCCa 2 18 348 367 [ce6:X:14164610-14164629:-] 0.4202 142 7 -16.16 -0.6234 MIMAT0015112 cel-miR-229* 181527 sym-4 gaUACUGUGGGC-UAUGGAAAGa ||| |: :| | ||||||| cuAUGUGAUGUGUAAACCUUUCg 2 21 287 309 [ce6:X:14164668-14164690:-] 0.4202 151 7 -16.83 -0.6915 MIMAT0015119 cel-miR-247* 181527 sym-4 ccauuaaucuuUGAAAAGAGAu :||||||||| cgcgcagcuuuGCUUUUCUCUa 2 12 257 278 [ce6:X:14164699-14164720:-] 0.4202 151 7 -13.76 -0.6823 MIMAT0015119 cel-miR-247* 181527 sym-4 ccauUAAUCUUUGAAAAGAGAu |||| |:||||||:| agauAUUAAUCAUUUUUCUUUg 2 19 14 35 [ce6:X:14164942-14164963:-] 0.5099 146 0 -10.09 -0.1249 MIMAT0015239 cel-miR-786* 181527 sym-4 cauuuaugggGUUGACUAUAAgc :||| |||||| -uuuucuuaaUAACAGAUAUUaa 3 14 1 22 [ce6:X:14164955-14164976:-] 0.5995 133 0 -6.98 -0.4458 MIMAT0006587 cel-miR-1820 181527 sym-4 cuuguaguagcuuuuuGUUAGUUUu :||||||| gauuuuuguuuuuuuuUAAUCAAAc 2 10 115 139 [ce6:X:14164838-14164862:-] 0.4202 141 7 -5.84 -0.7343 MIMAT0011444 cel-miR-2214 181527 sym-4 uugcggccaguucaaCAACAGUUAc | ||||||| uuaaucaaaccgcacGAUGUCAAUa 2 11 130 154 [ce6:X:14164823-14164847:-] 0.4202 142 7 -11.79 -1.0702 MIMAT0011451 cel-miR-2217* 181527 sym-4 cuAGCUGUGGCUGACGGGUGAGAc |:|| |:: | |||||||| cuUUGA-AUUUUCAUCCCACUCUa 2 23 177 199 [ce6:X:14164778-14164800:-] 0.4202 152 7 -18.67 -0.9011 MIMAT0000047 cel-miR-75 181527 sym-4 acuucGGCCAACCAUCGAAAUu ||| || ||||||| cgaccCCGAGUG--AGCUUUAu 2 18 80 99 [ce6:X:14164878-14164897:-] 0.4202 146 7 -14.03 -0.1767 MIMAT0000051 cel-miR-79 181527 sym-4 ucgaaaccaUUGGAUCGAAAUa :| : ||||||| accgaccccGAGUGAGCUUUAu 2 14 78 99 [ce6:X:14164878-14164899:-] 0.4202 141 7 -9.49 -0.1973 MIMAT0000286 cel-miR-231 181527 sym-4 aaGAC-GGACAACUAGUGC-UCGAAu :|| ::| ||| ||:|| ||||| uuUUGUUUUUUUGCUCGCGCAGCUUu 2 23 242 267 [ce6:X:14164710-14164735:-] 0.4202 133 0 -20.24 -0.1942 MIMAT0004231 cel-miR-796 181527 sym-4 aaugAUUGGAGUUGAUGU-AAGGu ||||| || |||| |||| uuggUAACC-CA--UACAGUUCCa 2 20 357 377 [ce6:X:14164600-14164620:-] 0.4202 122 0 -17.12 -1.0008

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 sym-4; CELE_R03E1.1; R03E1.1 cel-miR-231 241 268 -AAGACGGAC-AACUAGUGC-UCGAAU ||:||::| ||| ||:|| ||||| CUUUUGUUUUUUUGCUCGCGCAGCUUU sym-4; CELE_R03E1.1; R03E1.1 cel-miR-233 255 273 -GGCGUGUACGCGUAACGAGUU :|||:|| || |||||: CUCGCGCA-GCU--UUGCUUU- sym-4; CELE_R03E1.1; R03E1.1 cel-miR-234 380 400 UUCCCAUAAGA-GCUCGUUAUU- || |||| :|||:||||| ---UGUUUUCUAUGAGUAAUAAA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-35 67 94 -UGACGAUCAAAGGU--GGGC-CACU- || || ||: |||| |||| AACGGCGUCAAACCGACCCCGAGUGAG sym-4; CELE_R03E1.1; R03E1.1 cel-miR-39 69 94 GUUCGACUAAA---UGUGGGC-CACU- :|| || |||| |||| -CGGCGUCAAACCGAC-CCCGAGUGAG sym-4; CELE_R03E1.1; R03E1.1 cel-miR-40 69 94 AAUCGACUACA---UGUGGGC-CACU- :|| || |||| |||| -CGGCGUCAAACCGAC-CCCGAGUGAG sym-4; CELE_R03E1.1; R03E1.1 cel-miR-75 80 100 ACUUCGGC-CAACCAUCGAAAUU || ||| || ||||||| CGACCCCGAGUG---AGCUUUAU sym-4; CELE_R03E1.1; R03E1.1 cel-miR-78 197 226 CGUGUUU---GUUGGU----CCGGAGGU- :|| :|:|| ||:||||| CUACUCUUUUUAGCCCUAUUGGUCUCCAA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-796 356 379 -AAUGAUUGGAGUUGAUGU-AAGGU- ||: ||||| || |||| ||||| GUUGGUAACC-CA--UACAGUUCCAA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-87 256 273 CGUGUGGACUUUGAAACGAGUG |:|:| :|||||||: UCGCGCA----GCUUUGCUUU- sym-4; CELE_R03E1.1; R03E1.1 cel-miR-231 242 267 AAGAC-GGACAACUAGUGC-UCGAAu ||:|| ::| ||| ||:|| ||||| TTTTGTTTTTTTGCTCGCGCAGCTTt sym-4; CELE_R03E1.1; R03E1.1 cel-miR-233 252 273 ggCGUGUACG-CGUAACGAguu || |: || || ||||| ttGCTCGCGCAGCTTTGCTttt sym-4; CELE_R03E1.1; R03E1.1 cel-miR-234 377 398 UUCCCAUAAGA-GCUCGUUAUU || || |||| :|||:||||| AAATGTTTTCTATGAGTAATAA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-35 68 92 UGACGAUCA--AAGGU--GGGC-CACU || || || ||: |||| |||| ACGGC--GTCAAACCGACCCCGAGTGA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-39 75 92 GUUCGACUAAAUGUGGGC-CACU ||| | | || |||| |||| CAAACCG----AC-CCCGAGTGA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-40 71 92 aaucgacuacaUGUGGGC-CACU || |||| |||| gcgtcaaaccgAC-CCCGAGTGA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-78 204 224 cguguuuguugguCCGGAGGU ||:||||| ttttagccctattGGTCTCCA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-796 357 377 AAUGAUUGGAGUUGAUGU-AAGGU ||: ||||| || |||| ||||| TTGGTAACC-CA--TACAGTTCCA sym-4; CELE_R03E1.1; R03E1.1 cel-miR-87 238 259 cguGUGGACUUUGAAACGAGUG | ::|| :|||||||:| tgtCTTTTGTTTTTTTGCTCGC sym-4; CELE_R03E1.1; R03E1.1 cel-miR-75 92 99 A-----------------------CUUCGGC-CAACCAUCGAAAUU || ||| || ||||||| UUUUACUACCAACGGCGUCAAACCGACCCCGAGUG---AGCUUUAU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score sym-4 RAID01605938 cel-miR-231-3p miRNA MIMAT0000286 sym-4 mRNA 181527 CLIP-seq//Prediction 0.6308 sym-4 RAID02218296 cel-miR-79-3p miRNA MIMAT0000051 sym-4 mRNA 181527 Prediction 0.1828 sym-4 RAID02669634 cel-miR-239a-5p miRNA MIMAT0000294 sym-4 mRNA 181527 CLIP-seq 0.5483 sym-4 RAID03241237 cel-miR-75-3p miRNA MIMAT0000047 sym-4 mRNA 181527 Prediction 0.1828 sym-4 RAID03863614 cel-miR-796 miRNA MIMAT0004231 sym-4 mRNA 181527 CLIP-seq//Prediction 0.6308