DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015102 cel-miR-60* 176718 ubq-2 uaaaauaccGUGAG-AAGGUCAa ||||| ||||||| -----ucuuCACUCGUUCCAGUc 2 14 1 18 [ce6:III:12977871-12977888:-] 0.6949 156 7 -18.60 -1.2519 MIMAT0015102 cel-miR-60* 176718 ubq-2 uaaaauaccGUGAG-AAGGUCAa ||||| ||||||| -----ucuuCACUCGUUCCAGUc 2 14 1 18 [ce6:III:12977871-12977888:-] 0.6949 156 7 -18.60 -1.2537 MIMAT0000313 cel-miR-258 176718 ubq-2 uuuuccuaaggagaGUUUUGg |||||| ugucgcuauuugugCAAAACg 2 8 55 75 [ce6:III:12977814-12977834:-] 0.6949 120 6 -7.34 -0.2921 MIMAT0006590 cel-miR-1823 176718 ubq-2 aaugAGGAUUUGUGAAGGUCAu ||:| | : ||||||| ----UCUUCACUCGUUCCAGUc 2 19 1 18 [ce6:III:12977871-12977888:-] 0.6949 150 7 -13.66 -1.2507 MIMAT0006590 cel-miR-1823 176718 ubq-2 aaugAGGAUUUGUGAAGGUCAu ||:| | : ||||||| ----UCUUCACUCGUUCCAGUc 2 19 1 18 [ce6:III:12977871-12977888:-] 0.6949 150 7 -13.66 -1.2525 MIMAT0006768 cel-miR-1828 176718 ubq-2 ugauaguGAAUUUACGAAGGUCa ||| | | |||||| ------uCUUCACUCGUUCCAGu 2 17 1 17 [ce6:III:12977872-12977888:-] 0.6949 124 6 -13.90 -0.4661 MIMAT0006768 cel-miR-1828 176718 ubq-2 ugauaguGAAUUUACGAAGGUCa ||| | | |||||| ------uCUUCACUCGUUCCAGu 2 17 1 17 [ce6:III:12977872-12977888:-] 0.6949 124 6 -13.90 -0.4786 MIMAT0006771 cel-miR-1829c 176718 ubq-2 auGUUGGUA-GAACUUAAAGCGAa :||:: | |||||| ||||| guUAAUUUUAAUUGAAUGUCGCUa 2 22 39 62 [ce6:III:12977827-12977850:-] 0.6949 136 0 -14.15 -0.1413 MIMAT0011426 cel-miR-2207* 176718 ubq-2 acACACGUAACUCGGACACGUa ||| |: | | ::|||||| aaUGU-CGCU-A-UUUGUGCAa 2 21 53 71 [ce6:III:12977818-12977836:-] 0.6949 126 6 -11.37 -0.4343 MIMAT0000290 cel-miR-235 176718 ubq-2 aguccggccccucuCACGUUau |||||| gaaugucgcuauuuGUGCAAaa 3 9 52 73 [ce6:III:12977816-12977837:-] 0.6949 120 0 -11.42 -0.3209 MIMAT0004219 cel-miR-784 176718 ubq-2 agaUGCAUGCGUCUAACACGgu |:|| ||| |||||| ugaAUGU-CGCUAUUUGUGCaa 3 20 51 71 [ce6:III:12977818-12977838:-] 0.6949 133 0 -17.25 -0.3569

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 ubq-2; ubib; ZK1010.1 cel-miR-249 8 26 CCGUUGCGAGUUUUCAGG-ACACU ||:|| ||||| |||| ----UCGUUCC--AGUCCAUGUGU ubq-2; ubib; ZK1010.1 cel-miR-784 53 71 AGAUGCAUGCGUCUAACACGGU |:|| ||| |||||| --AAUGU-CGCUAUUUGUGCA- ubq-2; ubib; ZK1010.1 cel-miR-249 4 25 ccguuGCGAGUUUUCAGG-ACACu ||:|| ||||| |||| tcactCGTTC--CAGTCCATGTGt ubq-2; ubib; ZK1010.1 cel-miR-784 51 71 agaUGCAUGCGUCUAACACGgu |:|| ||| |||||| tgaATGT-CGCTATTTGTGCaa

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score ubq-2 RAID01822937 cel-miR-784-5p miRNA MIMAT0004219 ubq-2 mRNA 176718 CLIP-seq//Prediction 0.6308 ubq-2 RAID03347250 cel-miR-235-3p miRNA MIMAT0000290 ubq-2 mRNA 176718 CLIP-seq//Prediction 0.6308