DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT034976 cel-miR-62 Caenorhabditis elegans F22D3.6 174135 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054 MIRT034601 cel-miR-80-5p Caenorhabditis elegans F22D3.6 174135 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054 MIRT034359 cel-miR-90-3p Caenorhabditis elegans F22D3.6 174135 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054 MIRT033689 cel-miR-259-5p Caenorhabditis elegans F22D3.6 174135 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054 MIRT033655 cel-miR-261 Caenorhabditis elegans F22D3.6 174135 Caenorhabditis elegans Sequencing Functional MTI (Weak) 20062054

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015111 cel-miR-124* 174135 F22D3.6 ugAUUUCAGUGAUCCCACGUACg |||||| |: ||||:||| cgUAAAGUAAU---GGUGUAUGa 2 22 114 133 [ce6:II:6947781-6947800:-] 0.7350 145 0 -16.91 -0.1891 MIMAT0015117 cel-miR-243* 174135 F22D3.6 caugcuagcgugGCUCUAu |||||| aaaaaagaaaaaCGAGAUg 2 8 664 682 [ce6:II:6947232-6947250:-] 0.5012 120 6 -12.70 -0.2167 MIMAT0000316 cel-miR-261 174135 F22D3.6 gcACUUUUGAUUUUUCGAu || :::: |||||||| auUGUGGGUGAAAAAGCUc 2 18 320 338 [ce6:II:6947576-6947594:-] 0.4796 153 7 -13.89 -0.2728 MIMAT0000317 cel-miR-262 174135 F22D3.6 uagucuuuuguagCUCUUUg |||||| aaaccgauggaagGAGAAAa 2 8 151 170 [ce6:II:6947744-6947763:-] 0.7350 120 6 -6.87 -0.3149 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaaagUGUCUUUGGUUACUUUu | | ||:||||||||| aaacaAAACAAGCCAAUGAAAa 2 18 520 541 [ce6:II:6947373-6947394:-] 0.4796 165 7 -17.05 -0.3586 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaaaGU-GUCUUUGGUUACUUUu || |: :||: ||||||| acgcCAUCGUGAAUGAAUGAAAc 2 19 183 205 [ce6:II:6947709-6947731:-] 0.5408 153 7 -9.41 -0.3152 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaaaGUGUCUUUGGUUACUUUu :::|| ||:||||||| gaaaUGUAG-UACUAAUGAAAc 2 19 61 81 [ce6:II:6947833-6947853:-] 0.3616 152 7 -12.31 -0.4901 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaaagugUCUUUGGUUACUUuu ||||| |||||| uggaaggAGAAAAAAAUGAAcg 3 16 158 179 [ce6:II:6947735-6947756:-] 0.6684 139 0 -9.52 -0.1602 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaAAGUGUCUUUGGUUA-CUUUu ||:: |||| :|||| |||| acUUUGAAGAAUUCAAUAGAAAa 2 21 642 664 [ce6:II:6947250-6947272:-] 0.4796 136 0 -11.51 -1.1903 MIMAT0015241 cel-miR-797* 174135 F22D3.6 uaaagugucuuugGUUACUUuu ||||||| cucauuuauuuuaCAAUGAAua 3 10 87 108 [ce6:II:6947806-6947827:-] 0.5483 125 0 -8.23 -0.1166 MIMAT0005033 cel-miR-1020 174135 F22D3.6 gacuuucacaguguCUUAUUa |||||| auuuauuuuacaauGAAUAAa 2 8 90 110 [ce6:II:6947804-6947824:-] 0.7350 120 6 -5.26 -0.4027 MIMAT0005033 cel-miR-1020 174135 F22D3.6 gacuuucacaguguCUUAUUa |||||| aauuaauauaaaacGAAUAAa 2 8 133 153 [ce6:II:6947761-6947781:-] 0.7350 120 6 -4.19 -0.3176 MIMAT0015266 cel-miR-1822* 174135 F22D3.6 cggcuaucgaaagggUCUCUUUga :|||||| aauaaaccgauggaaGGAGAAAaa 3 10 148 171 [ce6:II:6947743-6947766:-] 0.7350 121 0 -19.18 -0.1642 MIMAT0006769 cel-miR-1829a 174135 F22D3.6 uuAUCUCUUUAAGGUUACCAac |: : ||| | |||||| aaUGCGUAAAGU--AAUGGUgu 3 21 110 129 [ce6:II:6947785-6947804:-] 0.7350 125 0 -7.44 -0.2290 MIMAT0011437 cel-miR-2211* 174135 F22D3.6 gcAGUCUACCU-CUUAUCUACCUcc | | | | | || |||||| uaUAAAACGAAUAAACCGAUGGAag 3 23 139 163 [ce6:II:6947751-6947775:-] 0.7350 125 0 -10.90 -0.1046 MIMAT0011437 cel-miR-2211* 174135 F22D3.6 gcagucuaccUCUUAUCUACCUCc | || | |||||| gaugccuauuAAAACAAAUGGAGa 2 15 376 399 [ce6:II:6947515-6947538:-] 0.4796 122 6 -10.96 -0.1021 MIMAT0011447 cel-miR-2216 174135 F22D3.6 cgGAUG--GCUGAAUUUUACACg :||| :|| ||||||| | uuUUACAAUGA-AUAAAAUGCGu 2 20 95 116 [ce6:II:6947798-6947819:-] 0.7350 120 0 -10.12 -0.1409 MIMAT0000042 cel-miR-70 174135 F22D3.6 uaCCUUUGUGGUUGCUG-CAUAAu ||: ::: ||:: || ||||| agGGGCGUGGCAGUAACAGUAUUc 2 22 425 448 [ce6:II:6947466-6947489:-] 0.4796 121 0 -12.49 -0.2044 MIMAT0000048 cel-miR-76 174135 F22D3.6 agUUCCGAAGUAGUUGUUGCUu | | || || | ||||| guAUGAAUUAAUAUAAAACGAa 2 21 128 149 [ce6:II:6947765-6947786:-] 0.7350 120 0 -7.88 -0.1833 MIMAT0000291 cel-miR-236 174135 F22D3.6 ucgCAGUAAUG-GACUGUCAUAAu | |:| :| | |||||||| aggGGCGUGGCAGUAACAGUAUUc 2 21 425 448 [ce6:II:6947466-6947489:-] 0.4796 151 7 -14.30 -0.2385 MIMAT0000697 cel-miR-355 174135 F22D3.6 guaucgaguccGAUUUUGUUu :|||||||| accgaugccuaUUAAAACAAa 2 11 373 393 [ce6:II:6947521-6947541:-] 0.4796 146 7 -10.08 -1.0666 MIMAT0000697 cel-miR-355 174135 F22D3.6 guauCGA-GUCCGAUUUUGUUu ||| | || ||||||| agauGCUACCGG-AAAAACAAa 2 18 506 526 [ce6:II:6947388-6947408:-] 0.4796 146 7 -11.31 -0.6568 MIMAT0000697 cel-miR-355 174135 F22D3.6 guaucgAGUCCGAUUUUGUUu |:| ||||||:| uaugaaUUAAUAUAAAACGAa 2 16 129 149 [ce6:II:6947765-6947785:-] 0.7350 131 0 -9.54 -0.2838

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 F22D3.6; CELE_F22D3.6 cel-miR-242 425 459 AGCUUCGUUUCCG--------------GAUGCGUU- | ||: ||| ||:||||| -AGGGGCGU-GGCAGUAACAGUAUUCUCUGCGCAAC F22D3.6; CELE_F22D3.6 cel-miR-245 593 610 CUCGAUGAACCUCCCCUGGUUA ||| |||||:||: --CCUAAUU---GGGGAUCAGG F22D3.6; CELE_F22D3.6 cel-miR-253 370 389 GGAAGGGU-GUUGCGGAUGAUU- :|| |:|:|||||:||| ----AUCACCGAUGCCUAUUAAA F22D3.6; CELE_F22D3.6 cel-miR-272 371 386 GUUUGUGGGUACGGAUGU |||| |||||||: ---UCACCGAUGCCUAUU F22D3.6; CELE_F22D3.6 cel-miR-39 332 358 GUUCGA-CUAAAUG--UGGGCCACU- ||||| |||| || ||| || AAAGCUCGAUUGUGUAACGCGGCGAA F22D3.6; CELE_F22D3.6 cel-miR-42 320 347 AGACAUCUACAA--UUGGGC---CACU :|||:|:|| |:|:|| ||| AUUGUGGGUGAAAAAGCUCGAUUGUGU F22D3.6; CELE_F22D3.6 cel-miR-52 1 29 UCGUGCCUUUGUAUAC------AUGCCCAC |||: | |||:|| ||||||| UGCAUUGC--CAUGUGAACACCUACGGGUC F22D3.6; CELE_F22D3.6 cel-miR-54 489 519 GAGCCUAAU------ACUUCUA--AUGCCCAU |||||| ||:|||| ||| || -ACGGAUUUGGUUUUUGGAGAUGCUACCGGA- F22D3.6; CELE_F22D3.6 cel-miR-58 51 92 UAACGG------------CAUG---ACU-UGCU--AGAGU ||||| |||| ||| |||| ||||| UUUGCCAAUUGAAAUGUAGUACUAAUGAAACGAAAUCUCAU F22D3.6; CELE_F22D3.6 cel-miR-67 301 328 AGAUGAGAAAGAUC-CU-CCA--ACACU- |:||: |:||| || ||| ||||: -AUGCUUA-UUUAGAGAUGGUAUUGUGGG F22D3.6; CELE_F22D3.6 cel-miR-77 552 577 -ACCUGUCGAUACCGG--ACUACUU- ||||||| ||| ||||||| UUGGACAGAU-UGGAAGAUGAUGAAA F22D3.6; CELE_F22D3.6 cel-miR-789 388 431 -UGUUAACC--------AC-UGGG-----UCCG----UCCCU |||| ||| || |||| :||| ||||: AACAAAUGGAGAUUUUAUGAACCCUCCGGGGGCAUAAAGGGGC F22D3.6; CELE_F22D3.6 cel-miR-242 432 457 AGCUUCGUU-UC----CGGAUGCGUU | | ||:|| || :||:||||| TGGCAGTAACAGTATTCTCTGCGCAA F22D3.6; CELE_F22D3.6 cel-miR-245 591 609 cUCGAUGAACCUCCCCUGGUua | ||| || |||||:|| aACCTAATT---GGGGATCAgg F22D3.6; CELE_F22D3.6 cel-miR-253 368 387 ggaAGGGUGUUGCGGAUGAUU || | |:|:|||||:||| ataTCAC-CGATGCCTATTAA F22D3.6; CELE_F22D3.6 cel-miR-272 368 385 guUUGUGGGUACGGAUgu | |||| ||||||| atATCACCGATGCCTAtt F22D3.6; CELE_F22D3.6 cel-miR-360 466 489 AACACUUGCCC---UAAUGCCagu ||| |: ||| ||||||| TTGAGGTAGGGAAAATTACGGaaa F22D3.6; CELE_F22D3.6 cel-miR-42 333 356 agacAUCU-ACA-AUUGGGCCACU | || ||| |||| ||| || aagcTCGATTGTGTAACGCGGCGA F22D3.6; CELE_F22D3.6 cel-miR-52 7 28 ucGUGCCUUUGUAUACAUGCCCAc ||:| :||| | ||||||| gcCATGTGAAC--ACCTACGGGTc F22D3.6; CELE_F22D3.6 cel-miR-54 494 519 gAGCCUAAUACUUCUA--AUGCCCau |:|| || ||:|||| ||| || tTTGGTTTTTGGAGATGCTACCGGaa F22D3.6; CELE_F22D3.6 cel-miR-58 63 90 UAACGGCAUG---AC-UUGC--UAGAGU | ||: |||| || |||| |||||| AATGTAGTACTAATGAAACGAAATCTCA F22D3.6; CELE_F22D3.6 cel-miR-67 300 326 agAUGAGAAAGAUC-CU-CC--AACACu |:|| | |:||| || || ||||| gaTGCT-TATTTAGAGATGGTATTGTGg F22D3.6; CELE_F22D3.6 cel-miR-77 553 575 ACCUGUCGAUACC--GGACUACUU ||||||| | ||| ||||||| TGGACAGAT-TGGAAGATGATGAA F22D3.6; CELE_F22D3.6 cel-miR-789 389 429 UGUUAACC--------AC-UGGG-----UCCG----UCCCu |||| ||| || |||| :||| |||| ACAAATGGAGATTTTATGAACCCTCCGGGGGCATAAAGGGg F22D3.6; CELE_F22D3.6 cel-miR-800 432 465 gCCGUC--UGUUA-AAG---------GCUCAAAc ||||| |||:| ||| || |||| tGGCAGTAACAGTATTCTCTGCGCAACGCGTTTt

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score F22D3.6 RAID01037407 cel-miR-259-5p miRNA MIMAT0000314 F22D3.6 mRNA 174135 NGS (Next Generation Sequencing) 0.5483 F22D3.6 RAID01162436 cel-miR-76-3p miRNA MIMAT0000048 F22D3.6 mRNA 174135 Prediction 0.1828 F22D3.6 RAID01349636 cel-miR-62 miRNA MIMAT0000034 F22D3.6 mRNA 174135 NGS (Next Generation Sequencing) 0.5483 F22D3.6 RAID01566854 cel-miR-261 miRNA MIMAT0000316 F22D3.6 mRNA 174135 NGS (Next Generation Sequencing) 0.5483 F22D3.6 RAID01653207 cel-miR-355-5p miRNA MIMAT0000697 F22D3.6 mRNA 174135 Prediction 0.1828 F22D3.6 RAID01942111 cel-miR-90-3p miRNA MIMAT0000061 F22D3.6 mRNA 174135 NGS (Next Generation Sequencing) 0.5483 F22D3.6 RAID03063284 cel-miR-236-3p miRNA MIMAT0000291 F22D3.6 mRNA 174135 Prediction 0.1828 F22D3.6 RAID03460279 cel-miR-80-5p miRNA MIMAT0000052 F22D3.6 mRNA 174135 NGS (Next Generation Sequencing) 0.5483 F22D3.6 RAID03562567 cel-miR-70-3p miRNA MIMAT0000042 F22D3.6 mRNA 174135 Prediction 0.1828