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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105672
UUCD1 version UUC-RaN-00717
Ensembl Protein ID ENSRNOP00000019497.5
UniProt Accession G3V7V2; G3V7V2_RAT
Genbank Protein ID EDL75341.1
Protein Name Angio-associated migratory protein (Predicted); Angio-associated, migratory cell protein
Genbank Nucleotide ID AABR07068075
Gene Name Aamp; Aamp_predicted; rCG_23739
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000014399.6 ENSRNOT00000019497.6 ENSRNOP00000019497.5
ENSRNOG00000014399.6 ENSRNOT00000083582.1 ENSRNOP00000070023.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
miRNAMapRAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.30e-34 114.7 358 394
UBD/Beta-Prp 9.10e-50 169.9 90 300
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H++++  l +   +  + ++s Dg++++WD rtg+ll
   Q: 358  HQSGIVQLLWeaGTAVVYTCSLDGVVRLWDARTGRLL 394
           999999*99*853256899***************975 PP
   

   UBD/Beta-Prp
   S: 7    ghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
            h  sv  cv    + ++l +tg++d++  vw++++g ll +  gh++ vt+  fs+d+ + +tg   +++kvw ++t + v +++   
   Q: 90   LHSASVF-CVSLdPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFE--A 175
           4444455.577735556666899************************************999***99*******************..8 PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtd 181
            ++  ++++p   +l++G++d    +w++++g c   t++g +   +c +v pdg+  v G  D+t+r+Wdlk+g+ ++ l  t+gh++
   Q: 176  GDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDCK--TFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLkgTEGHQG 262
           9999******9***********************9..7*******************************************99677*** PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
           + ++++ +++g  +++gs d + kl++  tg++v  ++
   Q: 263  PLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVGVFR 300
           ********************************998765 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MESESESGAA ADTPPLETLS FHGDEEIIEV VELDPGPPDP DDLAQEMEDV DFEEEEEEEE 60
GNDEGWVLEP QEGVVGSMEG PDDSEVTFAL HSASVFCVSL DPKTNTLAVT GGEDDKAFVW 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105672|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GGAAGGACTG CAGAGGAACT CACCGGAGAC ATACGAATGA AGGAAATTCG GGGAACTGTT 60
TTAAAACTGC AGGACCTTAG CTATCCTAAA GGATAACTAA CTCCATCCCG TTGAAGAGGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105672|E3,WD_repeat;UBD,Beta-Prp|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0045171--C:intercellular bridge
GO:0015630--C:microtubule cytoskeleton
GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis
KEGG rno:301512
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000794 Aegilops tauschii 34.62 5.00e-57 215.00
IUUC-Aml-001781 Ailuropoda melanoleuca 97.02 0.00e+00 752.00
IUUC-Atr-003169 Amborella trichopoda 35.82 4.00e-61 228.00
IUUC-Apl-003939 Anas platyrhynchos 67.55 1.00e-114 405.00
IUUC-Aca-004594 Anolis carolinensis 82.77 1.00e-174 605.00
IUUC-Aly-006277 Arabidopsis lyrata 31.25 4.00e-48 185.00
IUUC-Ath-007701 Arabidopsis thaliana 33.43 2.00e-56 212.00
IUUC-Ame-011651 Astyanax mexicanus 55.14 3.00e-134 471.00
IUUC-Bgr-012118 Blumeria graminis 22.82 2.00e-17 83.60
IUUC-Bta-012833 Bos taurus 97.24 0.00e+00 754.00
IUUC-Bdi-014289 Brachypodium distachyon 35.21 3.00e-62 232.00
IUUC-Bol-015313 Brassica oleracea 32.29 5.00e-53 201.00
IUUC-Bra-017115 Brassica rapa 31.43 2.00e-43 169.00
IUUC-Cel-018305 Caenorhabditis elegans 31.82 4.00e-38 152.00
IUUC-Cja-019433 Callithrix jacchus 95.63 0.00e+00 753.00
IUUC-Cfa-020093 Canis familiaris 98.39 0.00e+00 767.00
IUUC-Cpo-021742 Cavia porcellus 98.62 0.00e+00 763.00
IUUC-Cre-022781 Chlamydomonas reinhardtii 33.24 1.00e-42 167.00
IUUC-Csa-023498 Chlorocebus sabaeus 95.86 0.00e+00 752.00
IUUC-Cho-024628 Choloepus hoffmanni 97.77 6.00e-179 619.00
IUUC-Cin-025244 Ciona intestinalis 47.01 9.00e-86 310.00
IUUC-Csv-026218 Ciona savignyi 46.44 3.00e-88 318.00
IUUC-Cne-026911 Cryptococcus neoformans 27.23 1.00e-26 114.00
IUUC-Dre-028528 Danio rerio 65.82 4.00e-140 491.00
IUUC-Dno-029297 Dasypus novemcinctus 94.74 0.00e+00 759.00
IUUC-Dor-030543 Dipodomys ordii 97.16 7.00e-66 243.00
IUUC-Dme-031587 Drosophila melanogaster 31.02 8.00e-45 174.00
IUUC-Ete-033100 Echinops telfairi 96.60 9.00e-125 439.00
IUUC-Eca-034277 Equus caballus 98.12 0.00e+00 739.00
IUUC-Eeu-035052 Erinaceus europaeus 99.03 8.00e-107 380.00
IUUC-Fca-036115 Felis catus 98.39 0.00e+00 765.00
IUUC-Fal-036864 Ficedula albicollis 82.09 2.00e-177 615.00
IUUC-Gmo-039090 Gadus morhua 60.58 8.00e-99 353.00
IUUC-Gga-040545 Gallus gallus 76.98 4.00e-180 624.00
IUUC-Gac-042027 Gasterosteus aculeatus 63.40 2.00e-142 498.00
IUUC-Gma-044168 Glycine max 35.92 6.00e-58 218.00
IUUC-Ggo-045036 Gorilla gorilla 95.86 0.00e+00 752.00
IUUC-Hsa-046749 Homo sapiens 95.86 0.00e+00 752.00
IUUC-Hvu-047217 Hordeum vulgare 34.67 8.00e-59 220.00
IUUC-Itr-048114 Ictidomys tridecemlineatus 98.85 0.00e+00 762.00
IUUC-Kpa-049147 Komagataella pastoris 25.20 2.00e-24 107.00
IUUC-Lch-049747 Latimeria chalumnae 62.80 5.00e-140 490.00
IUUC-Lpe-051433 Leersia perrieri 32.42 3.00e-53 202.00
IUUC-Loc-052406 Lepisosteus oculatus 69.14 3.00e-161 561.00
IUUC-Lma-053153 Leptosphaeria maculans 27.75 3.00e-15 76.30
IUUC-Laf-053901 Loxodonta africana 98.85 0.00e+00 763.00
IUUC-Mcc-054990 Macaca mulatta 98.91 0.00e+00 707.00
IUUC-Meu-056844 Macropus eugenii 87.62 0.00e+00 659.00
IUUC-Mtr-057759 Medicago truncatula 37.18 3.00e-59 222.00
IUUC-Mla-058856 Melampsora laricipopulina 28.89 2.00e-36 146.00
IUUC-Mga-059749 Meleagris gallopavo 81.20 3.00e-177 613.00
IUUC-Mvi-060237 Microbotryum violaceum 31.15 7.00e-45 174.00
IUUC-Mmr-061270 Microcebus murinus 94.47 0.00e+00 748.00
IUUC-Mdo-062965 Monodelphis domestica 86.67 0.00e+00 664.00
IUUC-Mmu-064081 Mus musculus 98.62 0.00e+00 766.00
IUUC-Mac-065236 Musa acuminata 33.43 3.00e-56 212.00
IUUC-Mpu-066355 Mustela putorius furo 98.85 0.00e+00 768.00
IUUC-Mlu-067630 Myotis lucifugus 97.94 0.00e+00 755.00
IUUC-Nle-069701 Nomascus leucogenys 97.47 0.00e+00 758.00
IUUC-Opr-070337 Ochotona princeps 92.64 0.00e+00 697.00
IUUC-Ont-072614 Oreochromis niloticus 70.57 2.00e-149 522.00
IUUC-Ocu-073912 Oryctolagus cuniculus 97.71 0.00e+00 748.00
IUUC-Oba-075195 Oryza barthii 32.44 5.00e-54 204.00
IUUC-Obr-076059 Oryza brachyantha 31.61 3.00e-55 208.00
IUUC-Ogl-077318 Oryza glaberrima 32.18 4.00e-56 212.00
IUUC-Ogu-078579 Oryza glumaepatula 32.05 4.00e-54 205.00
IUUC-Oin-079340 Oryza indica 32.18 4.00e-56 212.00
IUUC-Olo-080813 Oryza longistaminata 32.64 2.00e-54 206.00
IUUC-Ome-081420 Oryza meridionalis 32.74 3.00e-54 205.00
IUUC-Oni-082650 Oryza nivara 32.44 5.00e-54 204.00
IUUC-Opu-083832 Oryza punctata 33.04 7.00e-56 211.00
IUUC-Oru-084207 Oryza rufipogon 32.44 5.00e-54 204.00
IUUC-Osa-085708 Oryza sativa 32.18 4.00e-56 212.00
IUUC-Ola-087164 Oryzias latipes 71.43 8.00e-150 523.00
IUUC-Olu-087824 Ostreococcus lucimarinus 37.33 7.00e-51 194.00
IUUC-Oga-088864 Otolemur garnettii 98.17 0.00e+00 754.00
IUUC-Oar-090115 Ovis aries 96.32 0.00e+00 756.00
IUUC-Ptr-091398 Pan troglodytes 97.24 0.00e+00 756.00
IUUC-Pan-092002 Papio anubis 96.09 0.00e+00 753.00
IUUC-Psi-093979 Pelodiscus sinensis 85.71 1.00e-87 315.00
IUUC-Pma-094618 Petromyzon marinus 61.11 2.00e-128 452.00
IUUC-Ppa-095351 Physcomitrella patens 37.71 9.00e-67 247.00
IUUC-Pfo-097078 Poecilia formosa 73.43 8.00e-152 530.00
IUUC-Pab-098540 Pongo abelii 97.47 0.00e+00 758.00
IUUC-Pop-099140 Populus trichocarpa 35.53 2.00e-58 219.00
IUUC-Pca-101072 Procavia capensis 89.89 0.00e+00 705.00
IUUC-Ppe-101979 Prunus persica 36.34 4.00e-59 221.00
IUUC-Pva-102400 Pteropus vampyrus 91.03 0.00e+00 684.00
IUUC-Pgr-103362 Puccinia graminis 28.80 2.00e-43 169.00
IUUC-Ptt-103756 Puccinia triticina 31.09 1.00e-32 133.00
IUUC-Sja-107693 Schizosaccharomyces japonicus 28.81 1.00e-43 170.00
IUUC-Spo-108208 Schizosaccharomyces pombe 29.66 7.00e-47 181.00
IUUC-Smo-109168 Selaginella moellendorffii 34.99 1.00e-57 217.00
IUUC-Sit-109978 Setaria italica 32.76 8.00e-56 211.00
IUUC-Sly-111316 Solanum lycopersicum 36.00 4.00e-60 225.00
IUUC-Stu-111956 Solanum tuberosum 37.32 3.00e-62 232.00
IUUC-Sbi-114189 Sorghum bicolor 33.05 4.00e-54 205.00
IUUC-Sre-115029 Sporisorium reilianum 33.43 1.00e-41 164.00
IUUC-Ssc-116045 Sus scrofa 85.82 2.00e-168 585.00
IUUC-Tgu-117514 Taeniopygia guttata 81.54 4.00e-176 610.00
IUUC-Tru-117851 Takifugu rubripes 67.99 2.00e-143 501.00
IUUC-Tsy-119140 Tarsius syrichta 92.18 0.00e+00 698.00
IUUC-Tni-120248 Tetraodon nigroviridis 68.56 8.00e-144 503.00
IUUC-Tca-121686 Theobroma cacao 32.59 2.00e-55 209.00
IUUC-Tae-123208 Triticum aestivum 34.76 1.00e-58 219.00
IUUC-Tur-126174 Triticum urartu 35.21 4.00e-57 215.00
IUUC-Tme-127079 Tuber melanosporum 27.92 9.00e-14 71.60
IUUC-Tbe-127476 Tupaia belangeri 98.07 4.00e-107 381.00
IUUC-Ttr-128182 Tursiops truncatus 96.78 0.00e+00 764.00
IUUC-Uma-129624 Ustilago maydis 32.84 1.00e-44 174.00
IUUC-Vpa-130605 Vicugna pacos 89.34 3.00e-173 600.00
IUUC-Vvi-131319 Vitis vinifera 34.01 3.00e-57 215.00
IUUC-Xtr-132193 Xenopus tropicalis 72.77 8.00e-167 579.00
IUUC-Xma-133880 Xiphophorus maculatus 72.57 1.00e-151 529.00
IUUC-Yli-134520 Yarrowia lipolytica 29.06 5.00e-27 115.00
Created Date 25-Jun-2017

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