iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131614

Ensembl Protein ID

VIT_12s0059g01180.t01

UniProt Accession

D7TEC6; D7TEC6_VITVI

Genbank Protein ID

CBI28849.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595765

Gene Name

VIT_12s0059g01180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_12s0059g01180	VIT_12s0059g01180.t01	VIT_12s0059g01180.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.60e-09	37.2	140	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++wfHp C+++++ee ++ ++ + C++C+s
   Q: 140  YC-KCEMPYNPDDLMVQCEGCKDWFHPSCMGMTIEEAKKLDH-FLCSDCSS 188
           78.7*****************************888888887.******86 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MAKTKPGKKD LDSYTIKGTN KVVRAGDCVL MRPSDSDKPP YVARVEKIEA DHRNNVKVRV 60
RWYYRPEESI GGRRQFHGAK ELFLSDHYDV QSAHTIEGKC IVHSFKNYTK LENVGAEDYF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCAAACAAA ATCTCTGGTC CGACATTGGT CTCTCTCTCT TTCTTTCTTT CTTTCTCTCT 60
CCCTTTCCCA GCATCTAGGG TTTGTGTTCC CACTCCCCCA CAAAACCCCT TCACTCCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

vvi:100253455

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002427	Ailuropoda melanoleuca	44.00	3.00e-10	60.10
IUUC-Atr-002986	Amborella trichopoda	93.98	3.00e-121	426.00
IUUC-Aca-005043	Anolis carolinensis	46.00	7.00e-11	62.40
IUUC-Aly-005717	Arabidopsis lyrata	85.78	1.00e-108	384.00
IUUC-Ath-007631	Arabidopsis thaliana	83.10	8.00e-108	381.00
IUUC-Ate-010345	Aspergillus terreus	42.11	2.00e-04	41.20
IUUC-Ame-011579	Astyanax mexicanus	44.00	2.00e-10	60.80
IUUC-Bgr-012210	Blumeria graminis	49.09	1.00e-08	53.90
IUUC-Bdi-014153	Brachypodium distachyon	77.78	5.00e-100	355.00
IUUC-Bol-016238	Brassica oleracea	85.58	5.00e-112	395.00
IUUC-Bra-017570	Brassica rapa	82.14	8.00e-110	388.00
IUUC-Cfa-021156	Canis familiaris	39.34	2.00e-10	60.80
IUUC-Cpo-022284	Cavia porcellus	44.00	2.00e-10	61.20
IUUC-Csa-023515	Chlorocebus sabaeus	44.00	3.00e-10	60.50
IUUC-Cne-026894	Cryptococcus neoformans	45.76	2.00e-09	57.00
IUUC-Dre-028285	Danio rerio	46.00	5.00e-11	62.80
IUUC-Ete-032380	Echinops telfairi	44.00	3.00e-10	60.10
IUUC-Eca-034302	Equus caballus	44.00	3.00e-10	60.50
IUUC-Fca-035578	Felis catus	44.00	2.00e-10	60.50
IUUC-Fal-037017	Ficedula albicollis	48.00	2.00e-11	63.90
IUUC-Gmo-038789	Gadus morhua	42.00	4.00e-10	59.70
IUUC-Gga-040290	Gallus gallus	48.00	2.00e-11	63.90
IUUC-Gma-043039	Glycine max	87.96	8.00e-116	408.00
IUUC-Ggo-044712	Gorilla gorilla	44.00	2.00e-10	60.80
IUUC-Hsa-046760	Homo sapiens	48.00	2.00e-11	63.90
IUUC-Lch-049793	Latimeria chalumnae	44.00	2.00e-10	60.80
IUUC-Lpe-051400	Leersia perrieri	82.41	2.00e-103	367.00
IUUC-Laf-053656	Loxodonta africana	44.00	2.00e-10	60.50
IUUC-Mcc-055658	Macaca mulatta	44.00	3.00e-10	60.50
IUUC-Mtr-057710	Medicago truncatula	87.96	2.00e-109	386.00
IUUC-Mmr-061132	Microcebus murinus	48.00	3.00e-11	63.90
IUUC-Mmu-063458	Mus musculus	48.00	2.00e-11	63.90
IUUC-Mac-064749	Musa acuminata	90.28	1.00e-112	397.00
IUUC-Mpu-066429	Mustela putorius furo	44.00	2.00e-10	60.50
IUUC-Mlu-067746	Myotis lucifugus	44.00	3.00e-10	60.50
IUUC-Nle-070143	Nomascus leucogenys	44.00	3.00e-10	60.50
IUUC-Ont-072257	Oreochromis niloticus	42.00	5.00e-10	59.70
IUUC-Oan-073654	Ornithorhynchus anatinus	44.00	4.00e-10	60.10
IUUC-Ocu-074417	Oryctolagus cuniculus	44.00	2.00e-10	60.50
IUUC-Oba-075188	Oryza barthii	78.67	7.00e-99	352.00
IUUC-Obr-076844	Oryza brachyantha	77.78	3.00e-100	356.00
IUUC-Ogl-077260	Oryza glaberrima	77.78	3.00e-100	356.00
IUUC-Ogu-078663	Oryza glumaepatula	79.63	1.00e-101	361.00
IUUC-Oin-079894	Oryza indica	79.17	2.00e-101	360.00
IUUC-Olo-080411	Oryza longistaminata	82.47	2.00e-99	353.00
IUUC-Ome-081623	Oryza meridionalis	79.17	1.00e-100	357.00
IUUC-Oni-082587	Oryza nivara	79.17	2.00e-101	360.00
IUUC-Opu-083591	Oryza punctata	81.48	3.00e-107	379.00
IUUC-Oru-084597	Oryza rufipogon	78.70	8.00e-101	358.00
IUUC-Osa-086057	Oryza sativa	79.17	2.00e-101	360.00
IUUC-Ola-087236	Oryzias latipes	44.00	1.00e-10	61.20
IUUC-Olu-087802	Ostreococcus lucimarinus	46.06	4.00e-42	162.00
IUUC-Oga-088662	Otolemur garnettii	42.11	1.00e-10	61.60
IUUC-Oar-090332	Ovis aries	44.00	2.00e-10	60.50
IUUC-Ptr-091328	Pan troglodytes	48.00	3.00e-11	63.50
IUUC-Ppa-095645	Physcomitrella patens	73.52	2.00e-88	317.00
IUUC-Pfo-096227	Poecilia formosa	44.00	1.00e-10	61.60
IUUC-Pab-097635	Pongo abelii	44.00	2.00e-10	60.50
IUUC-Pop-099322	Populus trichocarpa	83.80	4.00e-110	389.00
IUUC-Pca-100779	Procavia capensis	38.81	3.00e-10	60.50
IUUC-Ppe-101758	Prunus persica	96.30	6.00e-124	435.00
IUUC-Pva-102839	Pteropus vampyrus	44.00	3.00e-10	60.50
IUUC-Rno-105402	Rattus norvegicus	48.00	1.00e-11	64.30
IUUC-Smo-109649	Selaginella moellendorffii	71.36	7.00e-93	332.00
IUUC-Sit-110411	Setaria italica	81.48	3.00e-106	376.00
IUUC-Sly-111450	Solanum lycopersicum	90.28	3.00e-116	409.00
IUUC-Stu-112123	Solanum tuberosum	91.43	2.00e-115	407.00
IUUC-Sbi-114186	Sorghum bicolor	79.63	8.00e-104	368.00
IUUC-Sre-115140	Sporisorium reilianum	48.98	1.00e-08	55.10
IUUC-Ssc-115645	Sus scrofa	44.00	3.00e-10	60.50
IUUC-Tgu-117091	Taeniopygia guttata	48.00	2.00e-11	64.30
IUUC-Tru-118118	Takifugu rubripes	44.00	1.00e-10	61.20
IUUC-Tsy-119214	Tarsius syrichta	44.00	3.00e-10	60.50
IUUC-Tni-120632	Tetraodon nigroviridis	44.00	1.00e-10	61.20
IUUC-Tca-121518	Theobroma cacao	97.22	2.00e-124	436.00
IUUC-Tae-122704	Triticum aestivum	79.63	1.00e-98	351.00
IUUC-Tur-126461	Triticum urartu	66.67	1.00e-78	284.00
IUUC-Tbe-128138	Tupaia belangeri	50.00	3.00e-05	43.50
IUUC-Ttr-128194	Tursiops truncatus	48.00	2.00e-11	63.90
IUUC-Uma-129425	Ustilago maydis	45.65	8.00e-07	48.90
IUUC-Vpa-130595	Vicugna pacos	44.00	2.00e-10	60.50
IUUC-Xtr-132307	Xenopus tropicalis	44.00	2.00e-10	60.80
IUUC-Xma-134037	Xiphophorus maculatus	44.00	1.00e-10	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence