iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105684

Ensembl Protein ID

ENSRNOP00000000167.3

UniProt Accession

G3V606; G3V606_RAT

Genbank Protein ID

EDL80883.1; EDL80884.1

Protein Name

UBX domain containing 3, isoform CRA_a; UBX domain protein 10

Genbank Nucleotide ID

AC118094; CH473968

Gene Name

Ubxn10; Ubxd3; rCG_31545

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000027731.5	ENSRNOT00000000167.5	ENSRNOP00000000167.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/UBX	2.20e-08	34.9	202	271

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/UBX

   S: 7    tlqiRlpdGkrlvrkFpssttleqiyqfve..yllvessdpFeLvspfPrrtlkpeehmstlqeagLvpsgsl 77
            l++R p+G+r+vr F++s+ l+++ ++ e  + ++++    e +  +Prr +++ ++  +lqe+g++++++l
   Q: 202  LLAVRSPSGQRFVRYFRPSDDLQTVLEVAEqkNKATYQHCIVE-TMEVPRRRFSDLTK--SLQECGILHKSVL 271
           699***************************6555555555555.4469**********..9********9987 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAIEAPVNFA PPEHSTVVST AADSYTWQPS SLRMHVIRPK SAKGRKRPNL HLPQGIGDGS 60
HSGLTSSSPP RSSGSPSNQK REVCATAPAS QGAPDEMPEL LQQAPIRTAS SLNRYPVLPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGAGCTGAG CTGCGAGGTG AGAGGCTCTC TGTGGGTCCC CAGAAACTGG GAGCCAGGCC 60
TTTTGAGCAG CCTTCCCCAG GGGCAGAGCC AACTTGGATG GAGCCTGAGT GTGCAGCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR001012--UBX_dom

PROSITE

PS50033--UBX

Pfam

PF00789--UBX

SMART

SM00166--UBX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001817	Ailuropoda melanoleuca	63.48	2.00e-95	341.00
IUUC-Bta-013144	Bos taurus	59.07	4.00e-88	317.00
IUUC-Cja-019370	Callithrix jacchus	67.02	8.00e-96	343.00
IUUC-Cfa-020282	Canis familiaris	60.35	4.00e-90	324.00
IUUC-Cpo-021306	Cavia porcellus	69.37	5.00e-107	380.00
IUUC-Csa-023050	Chlorocebus sabaeus	67.73	3.00e-92	331.00
IUUC-Cho-024636	Choloepus hoffmanni	66.43	9.00e-100	356.00
IUUC-Dre-028601	Danio rerio	34.40	2.00e-26	112.00
IUUC-Dor-030602	Dipodomys ordii	65.96	2.00e-88	318.00
IUUC-Eca-033859	Equus caballus	64.18	6.00e-96	343.00
IUUC-Fca-035501	Felis catus	62.06	4.00e-89	320.00
IUUC-Fal-037570	Ficedula albicollis	42.86	1.00e-40	159.00
IUUC-Gmo-039507	Gadus morhua	32.65	9.00e-21	93.20
IUUC-Gga-041203	Gallus gallus	40.15	6.00e-40	157.00
IUUC-Ggo-044484	Gorilla gorilla	67.02	1.00e-99	355.00
IUUC-Hsa-047027	Homo sapiens	66.31	8.00e-99	353.00
IUUC-Itr-048642	Ictidomys tridecemlineatus	64.18	9.00e-98	349.00
IUUC-Lch-049476	Latimeria chalumnae	43.05	3.00e-41	162.00
IUUC-Loc-052557	Lepisosteus oculatus	37.55	1.00e-33	135.00
IUUC-Mcc-054777	Macaca mulatta	67.73	2.00e-92	332.00
IUUC-Mga-060142	Meleagris gallopavo	44.09	6.00e-46	177.00
IUUC-Mdo-062559	Monodelphis domestica	57.19	8.00e-78	283.00
IUUC-Mmu-063415	Mus musculus	89.40	3.00e-134	470.00
IUUC-Mpu-066556	Mustela putorius furo	59.57	1.00e-83	302.00
IUUC-Mlu-067960	Myotis lucifugus	65.48	2.00e-98	351.00
IUUC-Nle-069885	Nomascus leucogenys	66.31	2.00e-97	348.00
IUUC-Ocu-074098	Oryctolagus cuniculus	59.22	9.00e-82	296.00
IUUC-Oar-090164	Ovis aries	60.85	9.00e-92	329.00
IUUC-Ptr-090807	Pan troglodytes	68.09	7.00e-101	360.00
IUUC-Pan-092453	Papio anubis	67.38	9.00e-92	329.00
IUUC-Psi-093098	Pelodiscus sinensis	62.71	4.00e-29	120.00
IUUC-Pfo-097350	Poecilia formosa	33.87	1.00e-24	105.00
IUUC-Pab-097937	Pongo abelii	67.73	6.00e-101	360.00
IUUC-Sar-113428	Sorex araneus	58.13	2.00e-83	301.00
IUUC-Ssc-116402	Sus scrofa	63.12	9.00e-95	339.00
IUUC-Tgu-117356	Taeniopygia guttata	45.45	5.00e-45	174.00
IUUC-Tsy-119426	Tarsius syrichta	71.48	7.00e-98	349.00
IUUC-Tbe-127636	Tupaia belangeri	63.48	7.00e-93	333.00
IUUC-Ttr-128568	Tursiops truncatus	68.44	5.00e-102	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence