iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114596

UUCD1 version

UUC-SoB-01180

Ensembl Protein ID

Sb07g010440.1

UniProt Accession

A0A1B6PGT5; A0A1B6PGT5_SORBI

Genbank Protein ID

KXG24895.1; KXG24896.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766; CM000766

Gene Name

SORBI_007G098500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g010440	Sb07g010440.1	Sb07g010440.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/N-recognin/UBR-box	31.88	0.00e+00	939.00	IUUC-Hsa-046955

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEFPPDASDA MLLSSVARCA DSLPALFRLK FKFSNHDKVF SVDGVGTILL QILEEFLQVM 60
QNISVCNSNI CCTVKVCILS SMLEIFNPNI WRYEKCGTCL VPPLAYSPHV VQFVLKLFKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTCC CCCCTGATGC CTCTGATGCC ATGTTGTTAT CCTCGGTAGC AAGATGTGCT 60
GATAGTCTTC CAGCCTTGTT CAGACTGAAG TTCAAGTTCT CTAATCATGA CAAAGTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025704--E3_Ub_ligase_UBR4
IPR015943--WD40/YVTN_repeat-like_dom
IPR003126--Znf_UBR
IPR000433--Znf_ZZ

PROSITE

PS51157--ZF_UBR
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2

Pfam

PF13764--E3_UbLigase_R4
PF00569--ZZ

SMART

SM00396--ZnF_UBR1
SM00291--ZnF_ZZ

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000915	Aegilops tauschii	81.51	0.00e+00	7585.00
IUUC-Aml-001346	Ailuropoda melanoleuca	33.02	0.00e+00	955.00
IUUC-Atr-002587	Amborella trichopoda	56.58	0.00e+00	3965.00
IUUC-Apl-003678	Anas platyrhynchos	34.00	0.00e+00	893.00
IUUC-Aca-004517	Anolis carolinensis	40.83	2.00e-97	348.00
IUUC-Aly-006117	Arabidopsis lyrata	57.36	0.00e+00	5077.00
IUUC-Ath-007289	Arabidopsis thaliana	57.37	0.00e+00	5039.00
IUUC-Ame-011965	Astyanax mexicanus	29.74	2.00e-59	225.00
IUUC-Bta-012498	Bos taurus	32.80	0.00e+00	945.00
IUUC-Bdi-014555	Brachypodium distachyon	80.09	0.00e+00	7518.00
IUUC-Bol-015522	Brassica oleracea	57.51	0.00e+00	5104.00
IUUC-Bra-017090	Brassica rapa	57.37	0.00e+00	4838.00
IUUC-Cel-018504	Caenorhabditis elegans	27.45	3.00e-56	214.00
IUUC-Cja-018983	Callithrix jacchus	34.39	0.00e+00	898.00
IUUC-Cfa-020612	Canis familiaris	32.89	0.00e+00	956.00
IUUC-Cpo-021700	Cavia porcellus	32.76	0.00e+00	956.00
IUUC-Csa-023771	Chlorocebus sabaeus	34.31	0.00e+00	900.00
IUUC-Cho-024474	Choloepus hoffmanni	33.53	7.00e-127	449.00
IUUC-Cin-025247	Ciona intestinalis	31.15	9.00e-99	353.00
IUUC-Csv-026255	Ciona savignyi	30.65	3.00e-100	358.00
IUUC-Dre-028796	Danio rerio	32.76	0.00e+00	949.00
IUUC-Dno-030056	Dasypus novemcinctus	32.50	0.00e+00	945.00
IUUC-Dor-030711	Dipodomys ordii	33.49	0.00e+00	745.00
IUUC-Dme-032113	Drosophila melanogaster	30.37	0.00e+00	848.00
IUUC-Ete-032334	Echinops telfairi	34.33	0.00e+00	855.00
IUUC-Eca-033327	Equus caballus	32.85	0.00e+00	956.00
IUUC-Eeu-034698	Erinaceus europaeus	32.69	9.00e-74	273.00
IUUC-Fca-035430	Felis catus	32.67	0.00e+00	938.00
IUUC-Fal-037566	Ficedula albicollis	33.89	0.00e+00	891.00
IUUC-Gmo-038674	Gadus morhua	32.20	0.00e+00	926.00
IUUC-Gga-040641	Gallus gallus	33.98	0.00e+00	900.00
IUUC-Gac-041870	Gasterosteus aculeatus	32.94	0.00e+00	964.00
IUUC-Gma-042722	Glycine max	58.89	0.00e+00	5356.00
IUUC-Ggo-045360	Gorilla gorilla	32.80	0.00e+00	960.00
IUUC-Hsa-046955	Homo sapiens	32.75	0.00e+00	959.00
IUUC-Hvu-047255	Hordeum vulgare	81.25	0.00e+00	7556.00
IUUC-Itr-048714	Ictidomys tridecemlineatus	29.64	4.00e-63	236.00
IUUC-Lch-049893	Latimeria chalumnae	33.37	0.00e+00	847.00
IUUC-Lpe-050948	Leersia perrieri	79.15	0.00e+00	6878.00
IUUC-Loc-052019	Lepisosteus oculatus	29.63	0.00e+00	820.00
IUUC-Laf-054238	Loxodonta africana	32.80	0.00e+00	952.00
IUUC-Mcc-054905	Macaca mulatta	34.33	0.00e+00	895.00
IUUC-Meu-056297	Macropus eugenii	32.07	0.00e+00	807.00
IUUC-Mtr-058169	Medicago truncatula	58.89	0.00e+00	5352.00
IUUC-Mga-059621	Meleagris gallopavo	32.47	0.00e+00	962.00
IUUC-Mmr-061395	Microcebus murinus	34.79	0.00e+00	825.00
IUUC-Mdo-063037	Monodelphis domestica	34.10	0.00e+00	902.00
IUUC-Mmu-063200	Mus musculus	32.65	0.00e+00	952.00
IUUC-Mac-065267	Musa acuminata	67.33	0.00e+00	4273.00
IUUC-Mpu-066639	Mustela putorius furo	34.21	0.00e+00	891.00
IUUC-Mlu-067172	Myotis lucifugus	32.91	0.00e+00	956.00
IUUC-Nle-069162	Nomascus leucogenys	34.33	0.00e+00	897.00
IUUC-Opr-070567	Ochotona princeps	37.29	4.00e-122	434.00
IUUC-Ont-072364	Oreochromis niloticus	33.70	0.00e+00	869.00
IUUC-Oan-072804	Ornithorhynchus anatinus	32.64	5.00e-141	494.00
IUUC-Ocu-074637	Oryctolagus cuniculus	32.83	0.00e+00	953.00
IUUC-Oba-075215	Oryza barthii	80.42	0.00e+00	6943.00
IUUC-Obr-076704	Oryza brachyantha	80.54	0.00e+00	7393.00
IUUC-Ogl-077593	Oryza glaberrima	78.94	0.00e+00	6091.00
IUUC-Ogu-078732	Oryza glumaepatula	80.46	0.00e+00	6961.00
IUUC-Oin-079805	Oryza indica	88.43	0.00e+00	2937.00
IUUC-Olo-080261	Oryza longistaminata	80.40	0.00e+00	6959.00
IUUC-Ome-081392	Oryza meridionalis	80.48	0.00e+00	7292.00
IUUC-Oni-082086	Oryza nivara	80.53	0.00e+00	6956.00
IUUC-Opu-083535	Oryza punctata	81.11	0.00e+00	7042.00
IUUC-Oru-084735	Oryza rufipogon	80.45	0.00e+00	6944.00
IUUC-Ola-086799	Oryzias latipes	32.17	0.00e+00	938.00
IUUC-Olu-087777	Ostreococcus lucimarinus	32.13	2.00e-116	414.00
IUUC-Oga-088126	Otolemur garnettii	34.22	2.00e-88	320.00
IUUC-Oar-090428	Ovis aries	33.02	0.00e+00	945.00
IUUC-Ptr-091407	Pan troglodytes	32.80	0.00e+00	959.00
IUUC-Pan-091777	Papio anubis	33.06	0.00e+00	972.00
IUUC-Psi-093587	Pelodiscus sinensis	32.04	0.00e+00	924.00
IUUC-Pma-094248	Petromyzon marinus	35.87	6.00e-11	62.40
IUUC-Ppa-095781	Physcomitrella patens	47.86	0.00e+00	4123.00
IUUC-Pfo-097449	Poecilia formosa	32.04	0.00e+00	931.00
IUUC-Pab-098450	Pongo abelii	32.70	0.00e+00	932.00
IUUC-Pop-100041	Populus trichocarpa	60.00	0.00e+00	5388.00
IUUC-Pca-100663	Procavia capensis	30.36	1.00e-109	392.00
IUUC-Ppe-101386	Prunus persica	60.23	0.00e+00	5483.00
IUUC-Pva-102701	Pteropus vampyrus	31.25	0.00e+00	864.00
IUUC-Rno-105367	Rattus norvegicus	32.62	0.00e+00	951.00
IUUC-Sha-107490	Sarcophilus harrisii	34.16	0.00e+00	900.00
IUUC-Smo-109103	Selaginella moellendorffii	48.84	0.00e+00	4093.00
IUUC-Sit-110670	Setaria italica	88.89	0.00e+00	8162.00
IUUC-Sly-110952	Solanum lycopersicum	58.43	0.00e+00	5213.00
IUUC-Stu-112624	Solanum tuberosum	69.38	0.00e+00	2028.00
IUUC-Sar-113180	Sorex araneus	29.52	2.00e-132	468.00
IUUC-Ssc-115377	Sus scrofa	34.79	0.00e+00	825.00
IUUC-Tgu-117330	Taeniopygia guttata	34.02	0.00e+00	899.00
IUUC-Tru-117635	Takifugu rubripes	33.37	0.00e+00	867.00
IUUC-Tsy-119551	Tarsius syrichta	33.33	7.00e-145	509.00
IUUC-Tni-119727	Tetraodon nigroviridis	32.05	0.00e+00	922.00
IUUC-Tca-121017	Theobroma cacao	60.62	0.00e+00	5477.00
IUUC-Tae-122892	Triticum aestivum	82.22	7.00e-161	558.00
IUUC-Tur-126292	Triticum urartu	81.57	0.00e+00	7593.00
IUUC-Tbe-127560	Tupaia belangeri	32.43	4.00e-12	66.20
IUUC-Ttr-128332	Tursiops truncatus	33.44	5.00e-137	483.00
IUUC-Vpa-130615	Vicugna pacos	24.53	3.00e-41	165.00
IUUC-Vvi-131435	Vitis vinifera	60.38	0.00e+00	5340.00
IUUC-Xtr-132130	Xenopus tropicalis	31.53	8.00e-153	535.00
IUUC-Xma-133859	Xiphophorus maculatus	31.54	0.00e+00	871.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence