iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000052087.2	ENSRNOT00000092581.1	ENSRNOP00000075769.1
ENSRNOG00000052087.2	ENSRNOT00000080787.1	ENSRNOP00000070670.1
ENSRNOG00000052087.2	ENSRNOT00000080295.1	ENSRNOP00000070607.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.00e-07	30.4	58	98

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 2    ededkleqlve.MGFdreealqaLraannnleaAveyLldg 41
           ++e k+ ql+e +G +++e++ aL ++n++++ A++ Ll+g
   Q: 58   DFEAKVKQLMEvTGKNQDECIVALHDCNGDVNKAINTLLEG 98
           6799**********************************986 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MIVAEVLGKN HRCQQHTQHS HRNKWYSCTD LLTLLELSLA TAEQMRLAQV IFDKNDSDFE 60
AKVKQLMEVT GKNQDECIVA LHDCNGDVNK AINTLLEGSS DTTSWETVGG KKKNFGRESS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCCGCCTCT GCCGCCGCCG CCGCTTTGTA AGAGGCACAT TGGCAGGTAA CGAGCGGCGG 60
CGGCGGCGGC GGGTCCCGAG TCCAACGAGA GCAGCAGCGG TAATTGCCAC ACTATCCCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR022166--DUF3697_Uba2
IPR015940--UBA
IPR009060--UBA-like

Pfam

PF12478--DUF3697

SMART

SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0003723--F:RNA binding
GO:0010628--P:positive regulation of gene expression

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001276	Ailuropoda melanoleuca	78.70	0.00e+00	773.00
IUUC-Apl-004228	Anas platyrhynchos	65.31	6.00e-177	614.00
IUUC-Aca-004527	Anolis carolinensis	63.98	1.00e-162	567.00
IUUC-Ani-009287	Aspergillus nidulans	33.33	2.60e-02	34.30
IUUC-Aor-010169	Aspergillus oryzae	33.33	2.00e-02	35.00
IUUC-Ame-011075	Astyanax mexicanus	68.04	9.00e-92	332.00
IUUC-Bta-013126	Bos taurus	76.19	0.00e+00	1155.00
IUUC-Cel-018655	Caenorhabditis elegans	30.43	1.00e-05	45.40
IUUC-Cja-018765	Callithrix jacchus	78.14	0.00e+00	739.00
IUUC-Cfa-020094	Canis familiaris	78.11	0.00e+00	736.00
IUUC-Cpo-022213	Cavia porcellus	64.30	0.00e+00	820.00
IUUC-Csa-023092	Chlorocebus sabaeus	79.40	0.00e+00	739.00
IUUC-Cho-024520	Choloepus hoffmanni	69.01	3.00e-174	606.00
IUUC-Dre-028020	Danio rerio	68.04	2.00e-91	330.00
IUUC-Dno-029541	Dasypus novemcinctus	76.41	0.00e+00	655.00
IUUC-Dor-030998	Dipodomys ordii	78.25	3.00e-143	503.00
IUUC-Dme-031820	Drosophila melanogaster	33.79	2.00e-19	92.00
IUUC-Ete-032440	Echinops telfairi	81.49	8.00e-125	441.00
IUUC-Eca-033886	Equus caballus	78.69	0.00e+00	726.00
IUUC-Eeu-034730	Erinaceus europaeus	64.95	4.00e-176	612.00
IUUC-Fca-035418	Felis catus	79.76	0.00e+00	765.00
IUUC-Fal-037007	Ficedula albicollis	62.35	1.00e-167	584.00
IUUC-Fso-038371	Fusarium solani	33.33	7.20e+00	26.60
IUUC-Gmo-039678	Gadus morhua	60.16	3.00e-67	250.00
IUUC-Ggr-040008	Gaeumannomyces graminis	54.55	5.50e-01	30.40
IUUC-Gga-040206	Gallus gallus	65.44	4.00e-169	588.00
IUUC-Gac-041513	Gasterosteus aculeatus	57.81	3.00e-62	233.00
IUUC-Ggo-044994	Gorilla gorilla	78.46	0.00e+00	733.00
IUUC-Hsa-046793	Homo sapiens	78.44	0.00e+00	735.00
IUUC-Itr-048760	Ictidomys tridecemlineatus	80.02	0.00e+00	1237.00
IUUC-Lch-049528	Latimeria chalumnae	52.23	6.00e-110	392.00
IUUC-Loc-051733	Lepisosteus oculatus	71.27	1.00e-99	358.00
IUUC-Laf-054430	Loxodonta africana	79.02	0.00e+00	1133.00
IUUC-Mcc-055663	Macaca mulatta	79.55	0.00e+00	745.00
IUUC-Meu-056186	Macropus eugenii	74.58	5.00e-123	436.00
IUUC-Mor-057258	Magnaporthe oryzae	42.86	1.30e+00	28.90
IUUC-Mpo-057575	Magnaporthe poae	30.77	4.70e-01	30.40
IUUC-Mga-059934	Meleagris gallopavo	74.72	4.00e-120	426.00
IUUC-Mmr-061356	Microcebus murinus	75.98	0.00e+00	644.00
IUUC-Mdo-062368	Monodelphis domestica	66.98	2.00e-166	579.00
IUUC-Mmu-063573	Mus musculus	90.26	0.00e+00	1321.00
IUUC-Mpu-066908	Mustela putorius furo	77.07	0.00e+00	759.00
IUUC-Mlu-067819	Myotis lucifugus	77.07	0.00e+00	680.00
IUUC-Nle-069337	Nomascus leucogenys	78.14	0.00e+00	726.00
IUUC-Opr-070373	Ochotona princeps	71.01	2.00e-134	473.00
IUUC-Ont-072505	Oreochromis niloticus	58.58	5.00e-70	259.00
IUUC-Oan-072753	Ornithorhynchus anatinus	65.77	8.00e-165	574.00
IUUC-Ocu-074688	Oryctolagus cuniculus	77.55	0.00e+00	769.00
IUUC-Ola-086401	Oryzias latipes	57.14	1.00e-68	255.00
IUUC-Oga-088025	Otolemur garnettii	78.10	0.00e+00	984.00
IUUC-Oar-090208	Ovis aries	79.37	0.00e+00	1227.00
IUUC-Ptr-091655	Pan troglodytes	78.14	0.00e+00	730.00
IUUC-Pan-092399	Papio anubis	73.12	0.00e+00	726.00
IUUC-Psi-093660	Pelodiscus sinensis	65.73	3.00e-152	533.00
IUUC-Ppa-095430	Physcomitrella patens	32.31	1.00e-03	39.30
IUUC-Pfo-096668	Poecilia formosa	55.95	1.00e-79	291.00
IUUC-Pab-098257	Pongo abelii	77.80	0.00e+00	735.00
IUUC-Pca-100106	Procavia capensis	72.89	1.00e-178	620.00
IUUC-Pva-102913	Pteropus vampyrus	88.83	2.00e-122	434.00
IUUC-Sha-107046	Sarcophilus harrisii	64.69	1.00e-169	590.00
IUUC-Sar-113170	Sorex araneus	84.38	3.00e-130	459.00
IUUC-Ssc-115247	Sus scrofa	87.37	1.00e-125	444.00
IUUC-Tgu-116891	Taeniopygia guttata	65.47	0.00e+00	1102.00
IUUC-Tru-118012	Takifugu rubripes	61.36	6.00e-74	273.00
IUUC-Tsy-119649	Tarsius syrichta	74.01	1.00e-85	311.00
IUUC-Tni-120153	Tetraodon nigroviridis	62.96	6.00e-74	272.00
IUUC-Tbe-128003	Tupaia belangeri	73.03	1.00e-111	397.00
IUUC-Ttr-128220	Tursiops truncatus	78.11	0.00e+00	753.00
IUUC-Vda-129677	Verticillium dahliae	52.00	1.80e-01	32.00
IUUC-Vpa-130679	Vicugna pacos	61.54	9.00e-159	554.00
IUUC-Xtr-132377	Xenopus tropicalis	57.84	5.00e-135	475.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence