iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.18	5.00e-05	45.10	IUUC-Ath-006880
E3 activity/RING/RING	21.53	5.00e-06	49.30	IUUC-Hsa-046307
E3 activity/RING/RING	22.68	9.00e-06	48.10	IUUC-Mmu-063391

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Present with 339 molecules/cell in log phase SD medium.

Protein Sequence
(Fasta)

MSRVAQLDSI ALDKELYGQF WSEFNAAFNT SEHKEEWELA LNTVVFMCAT RFLPHYGSSC 60
TYGSALSGVV FQCRKRTLYV VTVLAGYVWK KITHIIFNGP HCGNQMMWLK LYKWVNLLYH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCGAG TTGCACAGCT CGACTCGATA GCGCTTGATA AAGAATTGTA TGGACAGTTT 60
TGGTCCGAGT TCAATGCAGC ATTCAATACG AGTGAACACA AAGAGGAATG GGAGTTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0024--Alternative initiation
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0576--Peroxisome
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR006845--Pex_N

Pfam

PF04757--Pex2_Pex12

Gene Ontology

GO:1990429--C:peroxisomal importomer complex
GO:0005778--C:peroxisomal membrane
GO:0046872--F:metal ion binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0016558--P:protein import into peroxisome matrix
GO:0000209--P:protein polyubiquitination

KEGG

sce:YJL210W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001595	Ailuropoda melanoleuca	22.22	1.00e-07	48.50
IUUC-Atr-002766	Amborella trichopoda	27.88	1.00e-06	45.10
IUUC-Apl-004019	Anas platyrhynchos	21.80	3.00e-08	50.40
IUUC-Aca-004791	Anolis carolinensis	30.12	6.00e-05	39.30
IUUC-Aly-005607	Arabidopsis lyrata	34.18	3.00e-06	43.90
IUUC-Ath-006880	Arabidopsis thaliana	34.18	1.00e-06	45.10
IUUC-Ago-007841	Ashbya gossypii	39.48	2.00e-46	176.00
IUUC-Acl-008272	Aspergillus clavatus	21.25	8.00e-04	36.20
IUUC-Afu-008859	Aspergillus fumigatus	21.90	1.00e-03	35.80
IUUC-Ang-009515	Aspergillus niger	56.52	3.00e-03	34.70
IUUC-Bgr-012274	Blumeria graminis	37.50	1.60e-01	28.50
IUUC-Bta-012949	Bos taurus	22.57	1.00e-08	51.20
IUUC-Bci-013654	Botrytis cinerea	47.83	5.30e-02	30.40
IUUC-Bdi-014062	Brachypodium distachyon	34.62	2.00e-07	47.40
IUUC-Bra-016860	Brassica rapa	32.91	3.00e-06	43.90
IUUC-Cja-019623	Callithrix jacchus	21.53	7.00e-08	48.90
IUUC-Cfa-020899	Canis familiaris	22.90	1.00e-08	51.60
IUUC-Cpo-021971	Cavia porcellus	21.92	8.00e-09	52.00
IUUC-Cre-022853	Chlamydomonas reinhardtii	64.29	5.40e+00	23.10
IUUC-Csa-023552	Chlorocebus sabaeus	21.92	8.00e-09	52.40
IUUC-Cho-024309	Choloepus hoffmanni	21.58	7.00e-09	52.40
IUUC-Cgl-026469	Colletotrichum gloeosporioides	25.00	4.40e-02	30.80
IUUC-Cne-027011	Cryptococcus neoformans	50.00	6.10e+00	23.10
IUUC-Dre-027627	Danio rerio	24.05	4.00e-07	46.60
IUUC-Dno-029220	Dasypus novemcinctus	21.88	6.00e-09	52.40
IUUC-Dor-030828	Dipodomys ordii	21.92	3.00e-09	53.90
IUUC-Dse-031469	Dothistroma septosporum	47.83	5.80e-02	30.80
IUUC-Dme-031865	Drosophila melanogaster	21.89	9.00e-05	38.50
IUUC-Ete-033020	Echinops telfairi	40.74	5.70e-02	29.30
IUUC-Eca-034078	Equus caballus	22.57	1.00e-09	55.10
IUUC-Fca-036406	Felis catus	22.90	6.00e-08	49.30
IUUC-Fal-037365	Ficedula albicollis	31.68	2.00e-05	40.80
IUUC-Fox-037825	Fusarium oxysporum	47.83	1.60e-01	28.50
IUUC-Fso-038458	Fusarium solani	39.02	1.40e-01	28.90
IUUC-Gga-040364	Gallus gallus	21.99	8.00e-10	55.50
IUUC-Gma-044174	Glycine max	32.89	3.00e-06	43.90
IUUC-Ggo-045248	Gorilla gorilla	22.11	8.00e-09	52.40
IUUC-Hsa-046307	Homo sapiens	21.53	6.00e-08	49.30
IUUC-Hvu-047618	Hordeum vulgare	34.62	3.00e-07	47.00
IUUC-Itr-048006	Ictidomys tridecemlineatus	22.22	3.00e-08	50.10
IUUC-Kpa-049382	Komagataella pastoris	23.26	3.00e-07	47.80
IUUC-Lch-049694	Latimeria chalumnae	24.04	3.00e-08	50.40
IUUC-Lpe-050779	Leersia perrieri	21.69	4.00e-03	33.10
IUUC-Laf-053543	Loxodonta africana	21.99	1.00e-07	48.10
IUUC-Mcc-055435	Macaca mulatta	21.92	5.00e-09	52.80
IUUC-Meu-056096	Macropus eugenii	21.18	1.00e-08	51.60
IUUC-Mor-057285	Magnaporthe oryzae	26.46	5.00e-05	40.40
IUUC-Mtr-058501	Medicago truncatula	31.58	4.00e-04	37.40
IUUC-Mga-060125	Meleagris gallopavo	21.65	5.00e-09	53.10
IUUC-Mvi-060252	Microbotryum violaceum	27.27	1.10e-01	29.30
IUUC-Mmr-061696	Microcebus murinus	21.88	1.00e-07	48.50
IUUC-Mdo-062789	Monodelphis domestica	22.22	1.00e-09	55.10
IUUC-Mmu-063391	Mus musculus	22.68	1.00e-07	48.10
IUUC-Mac-064555	Musa acuminata	25.84	6.00e-08	49.70
IUUC-Mpu-065832	Mustela putorius furo	21.65	1.00e-07	48.50
IUUC-Mlu-067811	Myotis lucifugus	21.88	1.00e-08	52.00
IUUC-Nfi-068362	Neosartorya fischeri	37.84	3.60e-02	30.80
IUUC-Ncr-068621	Neurospora crassa	47.83	1.90e-01	28.90
IUUC-Nle-069980	Nomascus leucogenys	22.22	9.00e-09	52.00
IUUC-Opr-070196	Ochotona princeps	21.53	2.00e-08	50.80
IUUC-Ocu-074466	Oryctolagus cuniculus	21.88	9.00e-09	52.00
IUUC-Oba-075893	Oryza barthii	20.59	2.00e-05	41.20
IUUC-Obr-076621	Oryza brachyantha	25.36	1.00e-07	48.50
IUUC-Ogl-077881	Oryza glaberrima	21.48	2.00e-07	48.10
IUUC-Ogu-078407	Oryza glumaepatula	21.15	1.00e-08	52.00
IUUC-Oin-080063	Oryza indica	23.92	5.00e-08	49.70
IUUC-Ome-081350	Oryza meridionalis	20.59	3.00e-05	40.40
IUUC-Opu-083358	Oryza punctata	23.27	3.00e-04	37.70
IUUC-Oru-084263	Oryza rufipogon	32.39	2.00e-04	37.70
IUUC-Osa-085561	Oryza sativa	23.92	5.00e-08	49.70
IUUC-Oga-088107	Otolemur garnettii	22.41	6.00e-09	52.80
IUUC-Oar-089967	Ovis aries	22.22	1.00e-07	48.10
IUUC-Ptr-091627	Pan troglodytes	21.92	4.00e-08	49.70
IUUC-Pan-091754	Papio anubis	21.92	5.00e-09	52.80
IUUC-Psi-093286	Pelodiscus sinensis	26.73	4.00e-04	36.60
IUUC-Pma-094543	Petromyzon marinus	30.61	9.00e-06	42.00
IUUC-Ppa-095816	Physcomitrella patens	22.34	1.70e-01	28.10
IUUC-Pab-097671	Pongo abelii	21.92	1.00e-08	52.00
IUUC-Pva-102697	Pteropus vampyrus	21.80	2.00e-08	50.80
IUUC-Pgr-103472	Puccinia graminis	38.10	3.40e-02	30.80
IUUC-Pte-104058	Pyrenophora teres	23.30	5.30e-02	30.40
IUUC-Rno-105925	Rattus norvegicus	22.26	1.00e-08	52.00
IUUC-Sha-106928	Sarcophilus harrisii	20.83	2.00e-08	50.80
IUUC-Ssl-108434	Sclerotinia sclerotiorum	47.83	4.90e-02	30.40
IUUC-Sit-110018	Setaria italica	33.33	2.00e-06	44.70
IUUC-Sly-111670	Solanum lycopersicum	35.90	2.00e-05	41.20
IUUC-Stu-112190	Solanum tuberosum	34.62	4.00e-05	40.40
IUUC-Sar-112920	Sorex araneus	22.84	1.00e-07	48.10
IUUC-Sbi-114300	Sorghum bicolor	19.86	4.00e-07	47.00
IUUC-Ssc-116289	Sus scrofa	21.38	3.00e-07	47.00
IUUC-Tgu-116936	Taeniopygia guttata	21.72	7.00e-08	48.90
IUUC-Tsy-119073	Tarsius syrichta	21.18	1.00e-08	51.60
IUUC-Tca-121117	Theobroma cacao	36.71	1.00e-04	38.90
IUUC-Tae-123108	Triticum aestivum	34.62	3.00e-07	47.00
IUUC-Tbe-127229	Tupaia belangeri	22.57	5.00e-09	52.80
IUUC-Ttr-129251	Tursiops truncatus	22.84	8.00e-09	52.40
IUUC-Vda-130008	Verticillium dahliae	47.83	1.60e-01	28.90
IUUC-Vpa-130084	Vicugna pacos	21.33	2.00e-06	44.30
IUUC-Vvi-130953	Vitis vinifera	34.18	6.00e-07	46.20
IUUC-Xtr-132429	Xenopus tropicalis	23.71	6.00e-07	46.20
IUUC-Xma-133897	Xiphophorus maculatus	29.00	5.00e-04	36.60
IUUC-Yli-134504	Yarrowia lipolytica	26.78	2.00e-03	34.70
IUUC-Zma-135123	Zea mays	33.33	4.00e-05	40.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence