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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018200
Ensembl Protein ID C32D5.9
UniProt Accession Q09490; LGG1_CAEEL
Genbank Protein ID CCD66037.1; AAG49393.1
Protein Name Protein lgg-1
Genbank Nucleotide ID FO080708; AF326943
Gene Name lgg-1; C32D5.9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00002980 C32D5.9 C32D5.9
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDiRefIndexPINAMentha
Protein 3D Structure
PDBMMDB
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/ATG8 7.60e-50 167.7 13 116
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/ATG8
   S: 1    krkeevekirdkfpdkiPvivekakkekipeldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnnslvsvsatlaeiyeeekdedgflyvayaseet 102
           kr++e++kir k+pd+iPviveka+k+k+ +ldkkkylvPsdltvgq++++irkr+qlr+edalf++vnn+++ + +t++++y+++++ed fly+ay++e++
   Q: 13   KRRAEGDKIRRKYPDRIPVIVEKAPKSKLHDLDKKKYLVPSDLTVGQFYFLIRKRIQLRPEDALFFFVNNVIPQTMTTMGQLYQDHHEEDLFLYIAYSDESV 114
           699*************************************************************************************************** PP
   S: 103  fG 104
           +G
   Q: 115  YG 116
           *9 PP
   
Organism Caenorhabditis elegans
Functional Description
(View)

Functional Description


     Ubiquitin-like modifier involved in autophagy and essential for dauer development and life-span extension (PubMed:12958363, PubMed:20523114). Plays a role in the distribution and clearance of germ cell specific P-granules from somatic cells (PubMed:19167332). Required for normal survival when exposed to pathogenic bacteria S.typhimurium probably by promoting autophagic degradation of intracellular S.typhimurium (PubMed:19667176). Plays a role in mitophagy (PubMed:25896323).
 Ubiquitin-like modifier involved in autophagy and essential for dauer development and life-span extension (PubMed:12958363, PubMed:20523114). Plays a role in the distribution and clearance of germ cell specific P-granules from somatic cells (PubMed:19167332). Required for normal survival when exposed to pathogenic bacteria S.typhimurium probably by promoting autophagic degradation of intracellular S.typhimurium (PubMed:19667176). Plays a role in mitophagy (PubMed:25896323).
Protein Sequence
(Fasta)
MKWAYKEENN FEKRRAEGDK IRRKYPDRIP VIVEKAPKSK LHDLDKKKYL VPSDLTVGQF 60
YFLIRKRIQL RPEDALFFFV NNVIPQTMTT MGQLYQDHHE EDLFLYIAYS DESVYGGEVE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018200|ULD,ATG8|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TAACCTTCTC TTCACACTAA CCTTCGAATC AAAATGAAGT GGGCTTACAA GGAGGAGAAC 60
AACTTTGAGA AGCGTCGTGC CGAAGGAGAC AAGATCCGCA GAAAGTACCC AGACCGTATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018200|ULD,ATG8|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0449--Lipoprotein
KW-0496--Mitochondrion
KW-1185--Reference proteome
Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom
Pfam

PF02991--Atg8
Gene Ontology

GO:0005776--C:autophagosome
GO:0000421--C:autophagosome membrane
GO:0005737--C:cytoplasm
GO:0031410--C:cytoplasmic vesicle
GO:0005741--C:mitochondrial outer membrane
GO:0005634--C:nucleus
GO:0000407--C:pre-autophagosomal structure
GO:0006914--P:autophagy
GO:0040024--P:dauer larval development
GO:0050830--P:defense response to Gram-positive bacterium
GO:0008340--P:determination of adult lifespan
GO:0010940--P:positive regulation of necrotic cell death
GO:0012501--P:programmed cell death
KEGG cel:CELE_C32D5.9
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000059 Aegilops tauschii 54.31 2.00e-35 139.00
IUUC-Aml-001323 Ailuropoda melanoleuca 83.62 4.00e-55 204.00
IUUC-Atr-002842 Amborella trichopoda 57.52 1.00e-29 120.00
IUUC-Apl-003994 Anas platyrhynchos 78.45 6.00e-52 194.00
IUUC-Aca-004544 Anolis carolinensis 75.00 7.00e-49 184.00
IUUC-Aly-005408 Arabidopsis lyrata 60.53 7.00e-38 147.00
IUUC-Ath-006721 Arabidopsis thaliana 61.06 1.00e-37 146.00
IUUC-Ago-007898 Ashbya gossypii 48.70 2.00e-31 126.00
IUUC-Acl-008314 Aspergillus clavatus 56.90 6.00e-37 144.00
IUUC-Afl-008708 Aspergillus flavus 56.90 8.00e-37 144.00
IUUC-Afu-009097 Aspergillus fumigatus 56.90 6.00e-37 144.00
IUUC-Ani-009196 Aspergillus nidulans 56.90 9.00e-37 143.00
IUUC-Ang-009530 Aspergillus niger 56.90 6.00e-37 144.00
IUUC-Aor-009909 Aspergillus oryzae 56.90 8.00e-37 144.00
IUUC-Ate-010358 Aspergillus terreus 56.90 6.00e-37 144.00
IUUC-Ame-010914 Astyanax mexicanus 82.76 4.00e-54 201.00
IUUC-Bgr-012248 Blumeria graminis 56.41 5.00e-37 144.00
IUUC-Bta-012805 Bos taurus 83.62 4.00e-55 204.00
IUUC-Bci-013959 Botrytis cinerea 56.20 2.00e-37 146.00
IUUC-Bdi-014929 Brachypodium distachyon 55.65 8.00e-36 140.00
IUUC-Bol-015412 Brassica oleracea 57.89 1.00e-36 143.00
IUUC-Bra-016921 Brassica rapa 57.52 2.00e-37 145.00
IUUC-Cja-019369 Callithrix jacchus 83.62 4.00e-55 204.00
IUUC-Cfa-020603 Canis familiaris 83.62 4.00e-55 204.00
IUUC-Cpo-022522 Cavia porcellus 78.45 7.00e-52 194.00
IUUC-Cre-022866 Chlamydomonas reinhardtii 59.65 2.00e-33 132.00
IUUC-Csa-024117 Chlorocebus sabaeus 83.62 4.00e-55 204.00
IUUC-Cho-025008 Choloepus hoffmanni 74.14 9.00e-49 183.00
IUUC-Cin-025297 Ciona intestinalis 82.91 1.00e-55 206.00
IUUC-Cgl-026691 Colletotrichum gloeosporioides 41.61 6.00e-31 125.00
IUUC-Cne-026889 Cryptococcus neoformans 53.45 3.00e-35 138.00
IUUC-Dre-028351 Danio rerio 83.62 2.00e-55 206.00
IUUC-Dno-029218 Dasypus novemcinctus 83.78 5.00e-52 196.00
IUUC-Dor-030245 Dipodomys ordii 83.62 4.00e-55 204.00
IUUC-Dse-031428 Dothistroma septosporum 56.90 5.00e-37 144.00
IUUC-Dme-031813 Drosophila melanogaster 85.34 4.00e-56 207.00
IUUC-Ete-032671 Echinops telfairi 82.76 8.00e-55 203.00
IUUC-Eca-033464 Equus caballus 78.45 7.00e-52 194.00
IUUC-Eeu-035131 Erinaceus europaeus 83.72 5.00e-39 150.00
IUUC-Fca-036493 Felis catus 83.62 3.00e-55 205.00
IUUC-Fal-037143 Ficedula albicollis 77.31 7.00e-52 194.00
IUUC-Fox-037846 Fusarium oxysporum 56.90 1.00e-36 143.00
IUUC-Fso-038134 Fusarium solani 56.90 7.00e-37 144.00
IUUC-Gmo-039671 Gadus morhua 82.76 4.00e-54 201.00
IUUC-Ggr-039770 Gaeumannomyces graminis 56.03 6.00e-36 140.00
IUUC-Gga-040257 Gallus gallus 82.91 2.00e-55 206.00
IUUC-Gac-042507 Gasterosteus aculeatus 82.05 2.00e-54 202.00
IUUC-Gma-043572 Glycine max 58.04 6.00e-29 117.00
IUUC-Ggo-044860 Gorilla gorilla 83.62 4.00e-55 204.00
IUUC-Hsa-045905 Homo sapiens 83.62 4.00e-55 204.00
IUUC-Hvu-047062 Hordeum vulgare 54.31 2.00e-35 139.00
IUUC-Itr-048405 Ictidomys tridecemlineatus 83.62 4.00e-55 204.00
IUUC-Kpa-049124 Komagataella pastoris 50.86 4.00e-33 131.00
IUUC-Lch-049798 Latimeria chalumnae 73.28 9.00e-50 186.00
IUUC-Lpe-051292 Leersia perrieri 54.78 9.00e-36 140.00
IUUC-Loc-052290 Lepisosteus oculatus 82.35 3.00e-55 205.00
IUUC-Laf-054203 Loxodonta africana 83.62 4.00e-55 204.00
IUUC-Mcc-055307 Macaca mulatta 83.62 4.00e-55 204.00
IUUC-Meu-056010 Macropus eugenii 78.45 7.00e-52 194.00
IUUC-Mor-057276 Magnaporthe oryzae 54.47 6.00e-36 140.00
IUUC-Mpo-057469 Magnaporthe poae 55.00 9.00e-36 140.00
IUUC-Mtr-058417 Medicago truncatula 57.39 5.00e-29 118.00
IUUC-Mla-059098 Melampsora laricipopulina 56.90 1.00e-37 146.00
IUUC-Mga-060108 Meleagris gallopavo 76.67 3.00e-52 194.00
IUUC-Mvi-060496 Microbotryum violaceum 56.64 5.00e-37 144.00
IUUC-Mmr-061776 Microcebus murinus 83.62 4.00e-55 204.00
IUUC-Mdo-062279 Monodelphis domestica 78.45 5.00e-52 194.00
IUUC-Mmu-064157 Mus musculus 83.62 4.00e-55 204.00
IUUC-Mac-065529 Musa acuminata 54.31 6.00e-30 121.00
IUUC-Mpu-066028 Mustela putorius furo 83.62 3.00e-55 205.00
IUUC-Mlu-067166 Myotis lucifugus 83.62 4.00e-55 204.00
IUUC-Nfi-068367 Neosartorya fischeri 56.90 6.00e-37 144.00
IUUC-Ncr-068894 Neurospora crassa 56.90 6.00e-37 144.00
IUUC-Nle-069220 Nomascus leucogenys 83.62 4.00e-55 204.00
IUUC-Opr-070777 Ochotona princeps 83.62 4.00e-55 204.00
IUUC-Ont-072343 Oreochromis niloticus 57.76 8.00e-38 147.00
IUUC-Oan-073612 Ornithorhynchus anatinus 83.72 8.00e-40 152.00
IUUC-Ocu-074148 Oryctolagus cuniculus 83.62 4.00e-55 204.00
IUUC-Oba-075722 Oryza barthii 53.91 1.00e-35 139.00
IUUC-Obr-076830 Oryza brachyantha 54.78 4.00e-35 138.00
IUUC-Ogl-077551 Oryza glaberrima 53.91 1.00e-35 139.00
IUUC-Ogu-078499 Oryza glumaepatula 53.91 1.00e-35 139.00
IUUC-Oin-079272 Oryza indica 53.91 4.00e-35 138.00
IUUC-Olo-080412 Oryza longistaminata 53.91 7.00e-35 137.00
IUUC-Ome-081990 Oryza meridionalis 53.91 4.00e-35 138.00
IUUC-Oni-082665 Oryza nivara 53.91 4.00e-35 138.00
IUUC-Opu-083501 Oryza punctata 54.78 4.00e-35 138.00
IUUC-Oru-084425 Oryza rufipogon 53.91 4.00e-35 138.00
IUUC-Osa-085618 Oryza sativa 53.91 4.00e-35 138.00
IUUC-Ola-086391 Oryzias latipes 72.81 2.00e-43 166.00
IUUC-Olu-087892 Ostreococcus lucimarinus 58.12 1.00e-37 146.00
IUUC-Oga-088312 Otolemur garnettii 83.62 4.00e-55 204.00
IUUC-Oar-089989 Ovis aries 83.62 4.00e-55 204.00
IUUC-Ptr-091108 Pan troglodytes 83.62 4.00e-55 204.00
IUUC-Pan-092269 Papio anubis 57.76 7.00e-38 147.00
IUUC-Psi-093055 Pelodiscus sinensis 78.45 7.00e-52 194.00
IUUC-Pma-094337 Petromyzon marinus 56.03 5.00e-40 154.00
IUUC-Pno-095035 Phaeosphaeria nodorum 56.90 1.00e-36 143.00
IUUC-Ppa-095257 Physcomitrella patens 58.62 7.00e-38 147.00
IUUC-Pfo-096947 Poecilia formosa 65.26 4.00e-32 128.00
IUUC-Pab-097660 Pongo abelii 83.62 4.00e-55 204.00
IUUC-Pop-100069 Populus trichocarpa 58.26 1.00e-30 123.00
IUUC-Pca-100230 Procavia capensis 83.62 4.00e-55 204.00
IUUC-Ppe-101863 Prunus persica 56.78 1.00e-29 120.00
IUUC-Pva-103103 Pteropus vampyrus 78.45 7.00e-52 194.00
IUUC-Pte-104230 Pyrenophora teres 56.90 1.00e-36 143.00
IUUC-Rno-105497 Rattus norvegicus 83.62 4.00e-55 204.00
IUUC-Sce-106150 Saccharomyces cerevisiae 53.45 2.00e-34 135.00
IUUC-Sha-106656 Sarcophilus harrisii 83.62 4.00e-55 204.00
IUUC-Sja-107857 Schizosaccharomyces japonicus 54.62 3.00e-36 142.00
IUUC-Spo-108156 Schizosaccharomyces pombe 55.17 6.00e-31 124.00
IUUC-Ssl-108578 Sclerotinia sclerotiorum 56.20 1.00e-37 146.00
IUUC-Smo-109082 Selaginella moellendorffii 57.39 3.00e-37 145.00
IUUC-Sit-110465 Setaria italica 55.17 1.00e-35 139.00
IUUC-Sly-111488 Solanum lycopersicum 55.17 8.00e-31 124.00
IUUC-Stu-112559 Solanum tuberosum 55.17 8.00e-31 124.00
IUUC-Sar-113670 Sorex araneus 75.86 5.00e-50 187.00
IUUC-Sbi-114782 Sorghum bicolor 55.17 5.00e-36 141.00
IUUC-Sre-114964 Sporisorium reilianum 57.76 7.00e-39 150.00
IUUC-Ssc-116182 Sus scrofa 83.62 4.00e-55 204.00
IUUC-Tgu-116669 Taeniopygia guttata 78.45 7.00e-52 194.00
IUUC-Tru-118632 Takifugu rubripes 82.05 2.00e-54 203.00
IUUC-Tsy-118919 Tarsius syrichta 78.45 7.00e-52 194.00
IUUC-Tni-120706 Tetraodon nigroviridis 56.10 6.00e-38 147.00
IUUC-Tca-121335 Theobroma cacao 56.12 1.00e-30 124.00
IUUC-Tre-122077 Trichoderma reesei 56.90 6.00e-37 144.00
IUUC-Tvi-122400 Trichoderma virens 56.90 6.00e-37 144.00
IUUC-Tae-122697 Triticum aestivum 54.31 1.00e-34 137.00
IUUC-Tur-126158 Triticum urartu 53.45 2.00e-34 136.00
IUUC-Tme-126955 Tuber melanosporum 56.78 9.00e-37 144.00
IUUC-Tbe-128099 Tupaia belangeri 59.48 1.00e-35 139.00
IUUC-Ttr-128712 Tursiops truncatus 78.45 7.00e-52 194.00
IUUC-Uma-129435 Ustilago maydis 57.76 8.00e-39 150.00
IUUC-Vda-129807 Verticillium dahliae 56.90 5.00e-37 144.00
IUUC-Vpa-130227 Vicugna pacos 83.72 7.00e-40 152.00
IUUC-Vvi-131213 Vitis vinifera 53.39 5.00e-31 124.00
IUUC-Xtr-132183 Xenopus tropicalis 78.45 7.00e-52 194.00
IUUC-Xma-133400 Xiphophorus maculatus 82.05 2.00e-54 202.00
IUUC-Yli-134327 Yarrowia lipolytica 55.17 3.00e-28 115.00
IUUC-Zma-135270 Zea mays 54.78 2.00e-35 139.00
Created Date 25-Jun-2017

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