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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Cel-018364
Ensembl Protein ID ZK20.3.1
UniProt Accession Q23451; Q23451_CAEEL
Genbank Protein ID CAA93780.2
Protein Name Uncharacterized protein
Genbank Nucleotide ID BX284602
Gene Name rad-23; CELE_ZK20.3; ZK20.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00013924 ZK20.3.1 ZK20.3.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDiRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
ULD/UDP/UBQ/UBQ_PIM UBQ_PIM 12826399
Classification
Family E-value Score Start End
UBD/Alpha-Helix/UBA 1.80e-12 47.2 128 167
ULD/UDP/UBQ/UBQ_PIM 1.00e-19 70.5 3 79
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/UBA
   S: 2    ededkleqlveMGFdreealqaLraannnleaAveyLldg 41
           e+e+ +  ++ MG+dre+ + aLraa++n+++Ave+Ll+g
   Q: 128  EQEENVLAITGMGYDREQTIAALRAAFWNPDRAVEFLLNG 167
           78899999999***************************86 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesg..vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           +++t++tl++ +f+le++ed+t++e+K+++a+e+g  + pe qkLIy+GkiL D+ ++ e+g +  ++v+++++k+k
   Q: 3    LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGddYAPELQKLIYNGKILDDSVKVGEVGFDSSKFVVVMLSKRK 79
           589**********************************************************************9986 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MVLSVTFRTL TQVNFNLELN EDQTIAEVKA LVASEKGDDY APELQKLIYN GKILDDSVKV 60
GEVGFDSSKF VVVMLSKRKV TEVAPSSTVA TAAEPVPVAA APASNPAPAA DVAPEAAAPA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018364|UBD,UBA;ULD,UBQ_PIM|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ACTTATTTTG TTCTTCAAAA TGGTTTTTTT GTTTTGTTCT TTTATTAATA ATCAAATGTT 60
TGTTTATTTT ATACATATAT ACTGCTTGTT TTGCATTAAT ATCAATCTGT TATCGATATT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018364|UBD,UBA;ULD,UBQ_PIM|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd
PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2
Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding
PRINTS

PR01839--RAD23PROTEIN
SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ
Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
KEGG cel:CELE_ZK20.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000770 Aegilops tauschii 31.11 3.00e-20 91.70
IUUC-Aml-001515 Ailuropoda melanoleuca 40.19 1.00e-25 108.00
IUUC-Atr-002756 Amborella trichopoda 32.13 2.00e-23 101.00
IUUC-Apl-003371 Anas platyrhynchos 38.50 9.00e-25 106.00
IUUC-Aca-004704 Anolis carolinensis 38.42 2.00e-19 89.00
IUUC-Aly-005486 Arabidopsis lyrata 32.30 2.00e-23 101.00
IUUC-Ath-006688 Arabidopsis thaliana 31.28 4.00e-22 97.80
IUUC-Ago-007830 Ashbya gossypii 30.56 6.00e-12 63.90
IUUC-Acl-008212 Aspergillus clavatus 39.84 7.00e-13 67.00
IUUC-Afl-008605 Aspergillus flavus 41.67 3.00e-15 74.70
IUUC-Afu-008877 Aspergillus fumigatus 39.84 3.00e-13 68.20
IUUC-Ani-009460 Aspergillus nidulans 39.37 2.00e-13 68.60
IUUC-Ang-009511 Aspergillus niger 36.36 2.00e-03 36.20
IUUC-Aor-010032 Aspergillus oryzae 41.67 3.00e-15 75.10
IUUC-Ate-010458 Aspergillus terreus 31.97 1.00e-21 95.50
IUUC-Ame-011342 Astyanax mexicanus 38.35 5.00e-21 94.00
IUUC-Bgr-012056 Blumeria graminis 31.58 1.00e-17 82.80
IUUC-Bta-012377 Bos taurus 40.29 8.00e-26 109.00
IUUC-Bci-013933 Botrytis cinerea 37.74 4.00e-12 64.30
IUUC-Bdi-014355 Brachypodium distachyon 29.68 2.00e-22 98.60
IUUC-Bol-015354 Brassica oleracea 32.60 5.00e-22 97.40
IUUC-Bra-016970 Brassica rapa 30.88 3.00e-24 104.00
IUUC-Cja-018946 Callithrix jacchus 40.67 1.00e-25 108.00
IUUC-Cfa-020577 Canis familiaris 39.81 2.00e-26 112.00
IUUC-Cpo-021850 Cavia porcellus 40.78 1.00e-27 115.00
IUUC-Cre-022810 Chlamydomonas reinhardtii 35.47 3.00e-21 94.40
IUUC-Csa-023183 Chlorocebus sabaeus 39.90 5.00e-26 110.00
IUUC-Cho-024814 Choloepus hoffmanni 38.60 3.00e-12 64.70
IUUC-Cin-025741 Ciona intestinalis 32.46 4.00e-22 97.40
IUUC-Csv-025823 Ciona savignyi 31.20 1.00e-18 85.50
IUUC-Cgl-026495 Colletotrichum gloeosporioides 39.00 1.00e-09 56.20
IUUC-Cne-027056 Cryptococcus neoformans 33.33 1.00e-09 56.20
IUUC-Cme-027260 Cyanidioschyzon merolae 31.82 1.00e-13 69.70
IUUC-Dre-028369 Danio rerio 35.02 2.00e-28 118.00
IUUC-Dno-030017 Dasypus novemcinctus 38.42 2.00e-24 105.00
IUUC-Dor-030358 Dipodomys ordii 39.34 9.00e-26 109.00
IUUC-Dse-031336 Dothistroma septosporum 40.95 1.00e-12 66.20
IUUC-Dme-032027 Drosophila melanogaster 41.10 6.00e-12 63.90
IUUC-Ete-032583 Echinops telfairi 35.00 1.00e-13 69.70
IUUC-Eca-034243 Equus caballus 38.94 3.00e-24 104.00
IUUC-Eeu-034721 Erinaceus europaeus 35.50 3.00e-14 71.20
IUUC-Fca-036051 Felis catus 39.32 5.00e-26 110.00
IUUC-Fal-037148 Ficedula albicollis 38.22 2.00e-24 105.00
IUUC-Fox-037960 Fusarium oxysporum 43.06 2.00e-11 62.00
IUUC-Fso-038107 Fusarium solani 37.74 2.00e-11 62.00
IUUC-Gmo-038751 Gadus morhua 32.31 7.00e-35 139.00
IUUC-Ggr-040116 Gaeumannomyces graminis 30.56 4.00e-12 64.30
IUUC-Gga-040133 Gallus gallus 37.69 6.00e-21 93.60
IUUC-Gac-041621 Gasterosteus aculeatus 35.86 4.00e-24 104.00
IUUC-Gma-044245 Glycine max 28.18 1.00e-29 122.00
IUUC-Ggo-045084 Gorilla gorilla 40.38 1.00e-25 109.00
IUUC-Hsa-046614 Homo sapiens 39.90 7.00e-26 109.00
IUUC-Hvu-047832 Hordeum vulgare 30.80 1.00e-19 89.40
IUUC-Itr-047875 Ictidomys tridecemlineatus 40.19 1.00e-25 108.00
IUUC-Kpa-049314 Komagataella pastoris 29.48 5.00e-23 100.00
IUUC-Lch-050563 Latimeria chalumnae 33.52 2.00e-16 78.60
IUUC-Lpe-051168 Leersia perrieri 31.16 3.00e-29 120.00
IUUC-Loc-051758 Lepisosteus oculatus 33.02 5.00e-26 110.00
IUUC-Lma-053328 Leptosphaeria maculans 36.00 3.00e-06 41.60
IUUC-Laf-054589 Loxodonta africana 38.24 5.00e-24 103.00
IUUC-Mcc-055860 Macaca mulatta 39.90 5.00e-26 110.00
IUUC-Meu-056459 Macropus eugenii 39.61 5.00e-27 113.00
IUUC-Mor-057287 Magnaporthe oryzae 40.26 2.00e-09 55.50
IUUC-Mpo-057609 Magnaporthe poae 40.95 2.00e-12 64.70
IUUC-Mtr-058239 Medicago truncatula 27.67 3.00e-27 114.00
IUUC-Mla-058961 Melampsora laricipopulina 32.03 3.00e-12 65.10
IUUC-Mga-060060 Meleagris gallopavo 38.46 7.50e-01 26.60
IUUC-Mvi-060220 Microbotryum violaceum 32.61 3.00e-12 65.10
IUUC-Mmr-060819 Microcebus murinus 39.41 9.00e-26 109.00
IUUC-Mdo-062742 Monodelphis domestica 40.10 4.00e-33 134.00
IUUC-Mmu-063258 Mus musculus 38.03 7.00e-25 106.00
IUUC-Mac-065180 Musa acuminata 29.41 1.00e-20 92.40
IUUC-Mpu-066684 Mustela putorius furo 40.38 5.00e-26 110.00
IUUC-Mlu-067787 Myotis lucifugus 39.61 5.00e-25 107.00
IUUC-Nfi-068390 Neosartorya fischeri 39.84 3.00e-13 67.80
IUUC-Ncr-068685 Neurospora crassa 37.98 9.00e-15 73.20
IUUC-Nle-069846 Nomascus leucogenys 34.16 2.00e-20 92.00
IUUC-Opr-070234 Ochotona princeps 50.00 3.00e-06 44.70
IUUC-Ont-072484 Oreochromis niloticus 37.68 2.00e-23 101.00
IUUC-Oan-073572 Ornithorhynchus anatinus 39.41 2.00e-21 95.10
IUUC-Ocu-074968 Oryctolagus cuniculus 40.38 1.00e-15 77.00
IUUC-Oba-074972 Oryza barthii 30.97 6.00e-29 119.00
IUUC-Obr-076909 Oryza brachyantha 30.00 2.00e-21 95.50
IUUC-Ogl-077021 Oryza glaberrima 28.51 1.00e-19 89.40
IUUC-Ogu-078883 Oryza glumaepatula 30.70 4.00e-19 87.80
IUUC-Oin-079817 Oryza indica 30.70 1.00e-18 86.30
IUUC-Olo-080559 Oryza longistaminata 29.01 4.00e-25 107.00
IUUC-Ome-081866 Oryza meridionalis 30.70 4.00e-19 87.40
IUUC-Oni-082812 Oryza nivara 30.97 9.00e-29 119.00
IUUC-Opu-083963 Oryza punctata 32.99 1.00e-24 105.00
IUUC-Oru-084942 Oryza rufipogon 31.55 2.00e-25 108.00
IUUC-Osa-086112 Oryza sativa 30.70 1.00e-18 86.30
IUUC-Ola-086540 Oryzias latipes 36.32 3.00e-21 95.10
IUUC-Olu-087843 Ostreococcus lucimarinus 34.39 3.00e-22 98.20
IUUC-Oga-089075 Otolemur garnettii 31.59 3.00e-32 130.00
IUUC-Oar-090387 Ovis aries 39.13 2.00e-25 108.00
IUUC-Ptr-090912 Pan troglodytes 39.90 6.00e-26 110.00
IUUC-Pan-092140 Papio anubis 39.90 9.00e-26 109.00
IUUC-Psi-093477 Pelodiscus sinensis 57.69 2.00e-11 62.40
IUUC-Pno-095064 Phaeosphaeria nodorum 37.50 6.00e-12 63.90
IUUC-Ppa-095654 Physcomitrella patens 28.83 2.00e-21 95.10
IUUC-Pfo-096607 Poecilia formosa 40.00 4.00e-24 103.00
IUUC-Pab-097738 Pongo abelii 40.38 8.00e-26 109.00
IUUC-Pop-099416 Populus trichocarpa 27.53 2.00e-29 121.00
IUUC-Pca-100348 Procavia capensis 39.61 5.00e-25 107.00
IUUC-Ppe-101830 Prunus persica 32.75 1.00e-23 102.00
IUUC-Pva-102412 Pteropus vampyrus 39.90 4.00e-26 110.00
IUUC-Pgr-103641 Puccinia graminis 36.36 6.00e-10 57.40
IUUC-Ptt-103717 Puccinia triticina 37.59 2.00e-14 72.40
IUUC-Pte-104303 Pyrenophora teres 37.14 3.00e-11 61.20
IUUC-Pyt-104580 Pyrenophora triticirepentis 37.14 3.00e-11 61.20
IUUC-Rno-105569 Rattus norvegicus 40.67 1.00e-26 112.00
IUUC-Sce-106214 Saccharomyces cerevisiae 56.82 8.00e-09 53.50
IUUC-Sha-106918 Sarcophilus harrisii 39.61 4.00e-25 107.00
IUUC-Sja-107851 Schizosaccharomyces japonicus 38.76 2.00e-18 85.50
IUUC-Spo-108298 Schizosaccharomyces pombe 33.94 2.00e-25 108.00
IUUC-Ssl-108382 Sclerotinia sclerotiorum 37.74 4.00e-11 60.80
IUUC-Smo-109518 Selaginella moellendorffii 27.72 3.00e-16 78.20
IUUC-Sit-109813 Setaria italica 30.59 1.00e-22 99.40
IUUC-Sly-111349 Solanum lycopersicum 30.28 7.00e-25 106.00
IUUC-Stu-112306 Solanum tuberosum 28.92 2.00e-25 108.00
IUUC-Sar-112925 Sorex araneus 39.11 4.00e-23 100.00
IUUC-Sbi-113871 Sorghum bicolor 30.49 8.00e-20 90.10
IUUC-Ssc-115460 Sus scrofa 32.79 7.00e-34 136.00
IUUC-Tgu-116918 Taeniopygia guttata 38.22 1.00e-24 105.00
IUUC-Tru-117920 Takifugu rubripes 39.42 5.00e-32 130.00
IUUC-Tsy-119385 Tarsius syrichta 39.76 2.00e-12 64.30
IUUC-Tni-120486 Tetraodon nigroviridis 36.98 1.00e-24 106.00
IUUC-Tca-121594 Theobroma cacao 30.28 2.00e-23 101.00
IUUC-Tre-121911 Trichoderma reesei 40.00 1.00e-11 62.80
IUUC-Tvi-122617 Trichoderma virens 36.52 6.00e-17 80.50
IUUC-Tae-124646 Triticum aestivum 31.11 2.00e-20 92.40
IUUC-Tur-126610 Triticum urartu 31.11 3.00e-20 92.40
IUUC-Tme-127092 Tuber melanosporum 32.47 2.00e-18 85.10
IUUC-Tbe-127603 Tupaia belangeri 38.97 6.00e-18 83.60
IUUC-Ttr-128464 Tursiops truncatus 38.94 4.00e-24 104.00
IUUC-Vda-129946 Verticillium dahliae 40.00 3.00e-12 65.10
IUUC-Vpa-130357 Vicugna pacos 57.69 1.00e-11 62.80
IUUC-Vvi-130842 Vitis vinifera 31.74 4.00e-23 100.00
IUUC-Xtr-132679 Xenopus tropicalis 57.69 2.00e-11 62.40
IUUC-Xma-133647 Xiphophorus maculatus 40.00 4.00e-24 104.00
IUUC-Yli-134615 Yarrowia lipolytica 37.24 1.00e-26 112.00
IUUC-Zma-135929 Zea mays 30.59 2.00e-22 98.60
Created Date 25-Jun-2017

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