iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007326

Ensembl Protein ID

AT3G13590.1

UniProt Accession

F4JDE3; F4JDE3_ARATH

Genbank Protein ID

AEE75379.1

Protein Name

Cysteine/Histidine-rich C1 domain family protein

Genbank Nucleotide ID

CP002686

Gene Name

At3g13590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G13590	AT3G13590.1	AT3G13590.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-08	34.8	49	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpn 42
           ++C++C+++ + e+    C++Cr+ fH++Cl +  + +  +
   Q: 49   AICKLCKSTVSFESFAYYCRECRSHFHKDCLTII-NAKIHE 88
           69***********99****************998.666555 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MNLLGTRNMM TLSKRSSKTK TGSVWFSYLE EHLVNVHIFE ESPRDSRDAI CKLCKSTVSF 60
ESFAYYCREC RSHFHKDCLT IINAKIHEHT LTFIRRENPF PCDVCGRDDK GMDMYGCLQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCTGT TAGGCACTAG AAACATGATG ACTCTGTCTA AGAGATCTTC GAAGACGAAG 60
ACTGGTTCTG TTTGGTTTTC GTATCTAGAG GAACATCTAG TAAATGTGTT TTGATAGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004146--DC1
IPR002219--PE/DAG-bd
IPR019786--Zinc_finger_PHD-type_CS
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50081--ZF_DAG_PE_2
PS01359--ZF_PHD_1

Pfam

PF03107--C1_2

SMART

SM00249--PHD

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding
GO:0035556--P:intracellular signal transduction

KEGG

ath:AT3G13590

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence